RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 TBKBP1A7MCY6 615 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 RANBP6O60518 1105 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 RPLP2P05387 115 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 DCNP07585 359 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 HSPD1P10809 573 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 TOP1P11387 765 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 MYCLP12524 364 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 LAG3P18627 525 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 IBSPP21815 317 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 NOVP48745 357 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 PLCB3Q01970 1234 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 CCDC173Q0VFZ6 552 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 SMC1AQ14683 1233 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 NONOQ15233 471 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 ZKSCAN2Q63HK3 967 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 CCDC149Q6ZUS6 474 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 RTN4RL1Q86UN2 441 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 NAPBQ9H115 298 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 PDCL3Q9H2J4 239 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 CHMP4BQ9H444 224 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 AGO3Q9H9G7 860 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 DLGAP2Q9P1A6 1054 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 DDX19BQ9UMR2 479 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 SMG5Q9UPR3 1016 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 SIT1Q9Y3P8 196 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 PCDHGA2Q9Y5H1 932 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 CDY2AQ9Y6F7 541 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 DSPP15924 2871 aaKnown RBP7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 PATJQ8NI35 1801 aa7.82□□□□□ -1.16
SPTLC2-206ENST00000557566 C2orf16Q68DN1 1984 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 M0QZ92 97 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 SLC30A4O14863 429 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 NARSO43776 548 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 PDHBP11177 359 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 BMP2P12643 396 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 PPM1AP35813 382 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 SARSP49591 514 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 MRPS6P82932 125 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 SP2Q02086 613 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 KRT17Q04695 432 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 ZNF543Q08ER8 600 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 PAK2Q13177 524 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 BMS1Q14692 1282 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 TMEM164Q5U3C3 297 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 IER5Q5VY09 327 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 ITPRIPQ8IWB1 547 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 C12orf76Q8N812 135 aaPredicted RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 STK32AQ8WU08 396 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 DNAJB3Q8WWF6 145 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 TRIM44Q96DX7 344 aaPredicted RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 TMEM47Q9BQJ4 181 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 TYW1Q9NV66 732 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 TUBE1Q9UJT0 475 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 GMEB2Q9UKD1 530 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 PADI3Q9ULW8 664 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 CA14Q9ULX7 337 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 MRPL11Q9Y3B7 192 aaKnown RBP7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 RALGAPA1Q6GYQ0 2036 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 WDFY3Q8IZQ1 3526 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 MAST4O15021 2626 aa7.81□□□□□ -1.16
SPTLC2-206ENST00000557566 C2orf71A6NGG8 1288 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 RNF113AO15541 343 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 CLASP2O75122 1294 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 CFBP00751 764 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 PROS1P07225 676 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 ZFYP08048 801 aaPredicted RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 CA8P35219 290 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 SCTRP47872 440 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 SHC2P98077 582 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 RELBQ01201 579 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 NEDD9Q14511 834 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 CDC37Q16543 378 aaPredicted RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 SWI5Q1ZZU3 235 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 GPATCH4Q5T3I0 446 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 METTL7BQ6UX53 244 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 FAM43BQ6ZT52 329 aaPredicted RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 FTSJ3Q8IY81 847 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 MRPL43Q8N983 215 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 KBTBD3Q8NAB2 608 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 TMEM87AQ8NBN3 555 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 FAM200AQ8TCP9 573 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 DDX1Q92499 740 aaKnown RBP7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 PDCD2LQ9BRP1 358 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 EPC1Q9H2F5 836 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 IGF2RP11717 2491 aa7.8□□□□□ -1.16
SPTLC2-206ENST00000557566 GOLGA6L22H0YM25 854 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 M0R2C6 588 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 LAMTOR5O43504 91 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 TBC1D4O60343 1298 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 LILRA1O75019 489 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 SNHG28P0DPA3 235 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms