RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 AFG1LQ8WV93 481 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 APBA2Q99767 749 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 CEP72Q9P209 647 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 ZNF215Q9UL58 517 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 ADGRA3Q8IWK6 1321 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 TNPO2O14787 897 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 TUBB4AP04350 444 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 HOXD8P13378 290 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 GARTP22102 1010 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 CNGA1P29973 690 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 HNRNPH3P31942 346 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 EFNA5P52803 228 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 NOGQ13253 232 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 MEA1Q16626 185 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 CACNA2D4Q7Z3S7 1137 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 BICD1Q96G01 975 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 CBWD1Q9BRT8 395 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 TMEM134Q9H6X4 195 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 AGPAT5Q9NUQ2 364 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
SHMT2-233ENST00000557529 COL1A2P08123 1366 aa13.63□□□□□ -0.23
SHMT2-233ENST00000557529 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-233ENST00000557529 SOWAHDA6NJG2 315 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 K7ERI5 159 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 MAGEB2O15479 319 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PIGRP01833 764 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 CCDC175P0C221 793 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-233ENST00000557529 TNFAIP2Q03169 654 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 ENPEPQ07075 957 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 BFSP1Q12934 665 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PTPN14Q15678 1187 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 DGKDQ16760 1214 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 EXOC3L4Q17RC7 722 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 GJC2Q5T442 439 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-233ENST00000557529 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PCIF1Q9H4Z3 704 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 PPP2R2CQ9Y2T4 447 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 DAAM1Q9Y4D1 1078 aa13.62□□□□□ -0.23
SHMT2-233ENST00000557529 TISP43B9A030 160 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 ANKRD63C9JTQ0 380 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 P4HA2O15460 535 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 ASAP2O43150 1006 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 ADCY3O60266 1144 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 MMP3P08254 477 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 ADSSP30520 456 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 FMO5P49326 533 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 LIG4P49917 911 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 VAMP7P51809 220 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 FCGRTP55899 365 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 CAPSQ13938 189 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 TFDP1Q14186 410 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 SLFN12LQ6IEE8 588 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 RAD9BQ6WBX8 426 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 NYAP1Q6ZVC0 841 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 TAS1R3Q7RTX0 852 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 USP37Q86T82 979 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 POMGNT1Q8WZA1 660 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 BAP1Q92560 729 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 SYN2Q92777 582 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-233ENST00000557529 CRACR2AQ9BSW2 395 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 C2orf40Q9H1Z8 148 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 FBXL5Q9UKA1 691 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
SHMT2-233ENST00000557529 H3BRB1 525 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 EPHB6O15197 1021 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 NOL4O94818 638 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 INSRRP14616 1297 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CYP2B6P20813 491 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CYLC1P35663 651 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CETN1Q12798 172 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 SNRNP35Q16560 246 aaKnown RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CDCA2Q69YH5 1023 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CYP4F22Q6NT55 531 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 SLC39A4Q6P5W5 647 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 WDR59Q6PJI9 974 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms