RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PPANQ9NQ55 473 aaKnown RBP19.2■□□□□ 0.66
XRCC3-218ENST00000557439 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 INPP5BP32019 993 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 SPP2Q13103 211 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 CUL1Q13616 776 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 UBAP2Q5T6F2 1119 aaKnown RBP19.19■□□□□ 0.66
XRCC3-218ENST00000557439 SYCE1Q8N0S2 351 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 MKNK1Q9BUB5 465 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 ZNF70Q9UC06 446 aaPredicted RBP19.19■□□□□ 0.66
XRCC3-218ENST00000557439 DHX9Q08211 1270 aaKnown RBP19.19■□□□□ 0.66
XRCC3-218ENST00000557439 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 KCNH7Q9NS40 1196 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 ATP8A1Q9Y2Q0 1164 aa19.19■□□□□ 0.66
XRCC3-218ENST00000557439 NCANO14594 1321 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 PPP1R37O75864 691 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 CALCAP01258 141 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 POU5F1Q01860 360 aaKnown RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 CHADLQ6NUI6 762 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 MIER3Q7Z3K6 550 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 VCPKMTQ9H867 229 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 TMOD2Q9NZR1 351 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 INTUQ9ULD6 942 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 MRPL11Q9Y3B7 192 aaKnown RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 CNTNAP1P78357 1384 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 BHMG1C9JSJ3 638 aaPredicted RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 CCDC188H7C350 402 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 MYZAPP0CAP1 466 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 MDH1P40925 334 aaKnown RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 B3GNT9Q6UX72 402 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 TMC3Q7Z5M5 1100 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 TADA2BQ86TJ2 420 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 ATP8B4Q8TF62 1192 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 AGPAT1Q99943 283 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 MXRA8Q9BRK3 442 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 KIFC3Q9BVG8 833 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 CNOT8Q9UFF9 292 aaKnown RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 HERC5Q9UII4 1024 aaKnown RBP19.18■□□□□ 0.66
XRCC3-218ENST00000557439 ZHX2Q9Y6X8 837 aa19.18■□□□□ 0.66
XRCC3-218ENST00000557439 FTLP02792 175 aaPredicted RBP19.17■□□□□ 0.66
XRCC3-218ENST00000557439 PTGISQ16647 500 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 C1orf220Q5T0J3 134 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 CHURC1Q8WUH1 139 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 KAT2BQ92831 832 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 CCPG1Q9ULG6 757 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 ODF2LQ9ULJ1 636 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 GOLGA6L10A6NI86 522 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 SLC20A2Q08357 652 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 UGCGQ16739 394 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 TTC31Q49AM3 519 aaPredicted RBP19.17■□□□□ 0.66
XRCC3-218ENST00000557439 RPUSD2Q8IZ73 545 aaKnown RBP19.17■□□□□ 0.66
XRCC3-218ENST00000557439 PCDHB18PQ96TA0 734 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 STRA6Q9BX79 667 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 SEL1LQ9UBV2 794 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 NOVA2Q9UNW9 492 aaKnown RBP19.17■□□□□ 0.66
XRCC3-218ENST00000557439 ALG6Q9Y672 507 aa19.17■□□□□ 0.66
XRCC3-218ENST00000557439 E7EVH7 732 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 SGPL1O95470 568 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 ANXA13P27216 316 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 NPEPPSP55786 919 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 DLGAP5Q15398 846 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 NFIL3Q16649 462 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 ZDHHC14Q8IZN3 488 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 CCDC26Q8TAB7 109 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 C18orf8Q96DM3 657 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 EPN3Q9H201 632 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 SNX24Q9Y343 169 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 HMGB1P1B2RPK0 211 aaPredicted RBP19.16■□□□□ 0.66
XRCC3-218ENST00000557439 SLC16A4O15374 487 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 KRT13P13646 458 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 GUCY2CP25092 1073 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 VAMP7P51809 220 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 PPP2R5AQ15172 486 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 PLA2G4FQ68DD2 849 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 STYK1Q6J9G0 422 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 EFCAB13Q8IY85 973 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 UHMK1Q8TAS1 419 aaKnown RBP19.16■□□□□ 0.66
XRCC3-218ENST00000557439 ZNF473Q8WTR7 871 aaKnown RBP19.16■□□□□ 0.66
XRCC3-218ENST00000557439 LRRC45Q96CN5 670 aa19.16■□□□□ 0.66
XRCC3-218ENST00000557439 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
XRCC3-218ENST00000557439 UTP11Q9Y3A2 253 aaKnown RBP19.16■□□□□ 0.66
XRCC3-218ENST00000557439 TCRBV7S2A1N4TA0A589 114 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 SOX10P56693 466 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 SF3A3Q12874 501 aaKnown RBP eCLIP19.15■□□□□ 0.66
XRCC3-218ENST00000557439 MESDQ14696 234 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ODF2Q5BJF6 829 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 SAAL1Q96ER3 474 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 CCT8L2Q96SF2 557 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ZNF536O15090 1300 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ANKRD62A6NC57 917 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 DHX15O43143 795 aaKnown RBP19.15■□□□□ 0.66
XRCC3-218ENST00000557439 SHBGP04278 402 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ADRB2P07550 413 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 EIF2AK2P19525 551 aaKnown RBP19.15■□□□□ 0.66
XRCC3-218ENST00000557439 DR1Q01658 176 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 MAP2K1Q02750 393 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms