RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 GTPBP6O43824 516 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-209ENST00000557342 NAMPTP43490 491 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 GRIN1Q05586 938 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-209ENST00000557342 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
SLIRP-209ENST00000557342 FBXO22Q8NEZ5 403 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-209ENST00000557342 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 CCDC51Q96ER9 411 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 PLIN2Q99541 437 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 FAM105AQ9NUU6 356 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-209ENST00000557342 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 MTUS1Q9ULD2 1270 aa13.82□□□□□ -0.2
SLIRP-209ENST00000557342 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 ZNF623O75123 536 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PPP6R2O75170 966 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 YEATS4O95619 227 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 RB1P06400 928 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PLA2G4BP0C869 781 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 POU3F3P20264 500 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 IGFBP4P22692 258 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 GUCY2CP25092 1073 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 CNNM3Q8NE01 707 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 CLP1Q92989 425 aaKnown RBP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 C17orf75Q9HAS0 396 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-209ENST00000557342 LMCD1Q9NZU5 365 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
SLIRP-209ENST00000557342 TCHHQ07283 1943 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 C5orf67F2Z3F1 127 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 RFXAPO00287 272 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 SPTLC2O15270 562 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 TSPAN1O60635 241 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 HIP1RO75146 1068 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 CTNNB1P35222 781 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 BMPR1AP36894 532 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 EFNA5P52803 228 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 DMP1Q13316 513 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 MAPK6Q16659 721 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 ZNF598Q86UK7 904 aaKnown RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 AAASQ9NRG9 546 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 PHLPP2Q6ZVD8 1323 aa13.8□□□□□ -0.2
SLIRP-209ENST00000557342 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
SLIRP-209ENST00000557342 H3BNC9 293 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 FGFR1P11362 822 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 PLCG1P19174 1290 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 GATMP50440 423 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 PKP1Q13835 747 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 AMHR2Q16671 573 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 NAALADL2Q58DX5 795 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 SPECC1Q5M775 1068 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
SLIRP-209ENST00000557342 SPRED2Q7Z698 418 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 HACE1Q8IYU2 909 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 KCNG4Q8TDN1 519 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 RAD54LQ92698 747 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
SLIRP-209ENST00000557342 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
SLIRP-209ENST00000557342 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-209ENST00000557342 MRPL9Q9BYD2 267 aaKnown RBP13.79□□□□□ -0.2
SLIRP-209ENST00000557342 FZD8Q9H461 694 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms