RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 IFT122Q9HBG6 1241 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 KCNMB3Q9NPA1 279 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 TBC1D13Q9NVG8 400 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 VAV3Q9UKW4 847 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 NR2E1Q9Y466 385 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 DENND4AQ7Z401 1863 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 OFD1O75665 1012 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 CXCL14O95715 111 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 GALTP07902 379 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 CTSAP10619 480 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 SP100P23497 879 aaPredicted RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 RAB27AP51159 221 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 POLGP54098 1239 aaPredicted RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 VCPP55072 806 aaKnown RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 CES5AQ6NT32 575 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 GLB1LQ6UWU2 654 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 CATSPER4Q7RTX7 472 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 KRT25Q7Z3Z0 450 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 DDX53Q86TM3 631 aaKnown RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 NLRP4Q96MN2 994 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 JPH2Q9BR39 696 aaPredicted RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
VRTN-202ENST00000557177 NRDE2Q9H7Z3 1164 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 AGPAT5Q9NUQ2 364 aa16.17■□□□□ 0.18
VRTN-202ENST00000557177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 C2CD4DB7Z1M9 353 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 QARSP47897 775 aaKnown RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 NPEPPSP55786 919 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 STK3Q13188 491 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 GIT2Q14161 759 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 LETM2Q2VYF4 491 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 LONRF3Q496Y0 759 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 PPP4R3AQ6IN85 833 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 KREMEN2Q8NCW0 462 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 AUTS2Q8WXX7 1259 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 PHF20Q9BVI0 1012 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 VN1R3Q9BXE9 311 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 DHX33Q9H6R0 707 aaKnown RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 TSHZ2Q9NRE2 1034 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 DZANK1Q9NVP4 752 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 WRAP73Q9P2S5 460 aaPredicted RBP16.16■□□□□ 0.18
VRTN-202ENST00000557177 DNAJB4Q9UDY4 337 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 ARID2Q68CP9 1835 aa16.16■□□□□ 0.18
VRTN-202ENST00000557177 B4GALT3O60512 393 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 MTHFRP42898 656 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 KIAA1841Q6NSI8 718 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
VRTN-202ENST00000557177 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 SLC7A3Q8WY07 619 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 RIPOR3Q96MK2 946 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 INPP5FQ9Y2H2 1132 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 PPME1Q9Y570 386 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 PCDHB2Q9Y5E7 798 aa16.15■□□□□ 0.18
VRTN-202ENST00000557177 MYO10Q9HD67 2058 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 CFAP54Q96N23 3096 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
VRTN-202ENST00000557177 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 P4HBP07237 508 aaKnown RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 GCFC2P16383 781 aaKnown RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 EPCAMP16422 314 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 AVPR2P30518 371 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 CA8P35219 290 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 SLC11A1P49279 550 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 RNASELQ05823 741 aaKnown RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 SCRN1Q12765 414 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 RARS2Q5T160 578 aaKnown RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 MRPL10Q7Z7H8 261 aaKnown RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 UBALD2Q8IYN6 164 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 C12orf76Q8N812 135 aaPredicted RBP16.14■□□□□ 0.17
VRTN-202ENST00000557177 HAS1Q92839 578 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 CACNA1HO95180 2353 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 STK36Q9NRP7 1315 aa16.14■□□□□ 0.17
VRTN-202ENST00000557177 CCDC194A0A1B0GVG4 234 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 TBX3O15119 743 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 BRD1O95696 1058 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 HOXA11P31270 313 aaPredicted RBP16.13■□□□□ 0.17
VRTN-202ENST00000557177 RFC5P40937 340 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 AFF1P51825 1210 aaKnown RBP16.13■□□□□ 0.17
VRTN-202ENST00000557177 UBXN11Q5T124 520 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 KANK3Q6NY19 840 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
VRTN-202ENST00000557177 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms