RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 INO80BQ9C086 356 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-213ENST00000556929 MAN1B1Q9UKM7 699 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 TRPV2Q9Y5S1 764 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 ALPK3Q96L96 1907 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 A0A087WZ62 844 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 BIN1O00499 593 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 GCNT3O95395 438 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 THPOP40225 353 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 EFNA5P52803 228 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 CRYBB1P53674 252 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-213ENST00000556929 NLRP12P59046 1061 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 TLE2Q04725 743 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 EHHADHQ08426 723 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM62Q0P6H9 643 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 STIM1Q13586 685 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 LRRC26Q2I0M4 334 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 ISM2Q6H9L7 571 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF720Q7Z2F6 126 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 HAUS6Q7Z4H7 955 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 SRGAP1Q7Z6B7 1085 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 UBE2Q1Q7Z7E8 422 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 KSR1Q8IVT5 923 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 BSNDQ8WZ55 320 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 HVCN1Q96D96 273 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 FDXACB1Q9BRP7 624 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-213ENST00000556929 HTATIP2Q9BUP3 242 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 NFKBIZQ9BYH8 718 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 CELF4Q9BZC1 486 aaKnown RBP10.72□□□□□ -0.69
TMEM260-213ENST00000556929 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 SLC39A2Q9NP94 309 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 TBC1D7Q9P0N9 293 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
TMEM260-213ENST00000556929 SYCE3A1L190 88 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 K7ERI5 159 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 SLC16A4O15374 487 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 GPR32O75388 356 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 UBE4BO95155 1302 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 CLTBP09497 229 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 CKBP12277 381 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 NMT1P30419 496 aaKnown RBP10.71□□□□□ -0.69
TMEM260-213ENST00000556929 PTENP60484 403 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 RBL2Q08999 1139 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
TMEM260-213ENST00000556929 FAAP100Q0VG06 881 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 STRN3Q13033 797 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 STK4Q13043 487 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 MORC3Q14149 939 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 KIAA0100Q14667 2235 aaKnown RBP10.71□□□□□ -0.69
TMEM260-213ENST00000556929 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.69
TMEM260-213ENST00000556929 KIZQ2M2Z5 673 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 FAM26DQ5JW98 314 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 CDCA2Q69YH5 1023 aaPredicted RBP10.71□□□□□ -0.69
TMEM260-213ENST00000556929 CTAGE1Q96RT6 745 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM206Q9H813 350 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM39AQ9NV64 488 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 EXOC7Q9UPT5 735 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 GINS2Q9Y248 185 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.69
TMEM260-213ENST00000556929 DENND3A2RUS2 1198 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 INO80B-WBP1J3KQ70 363 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 EIF3DO15371 548 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 CTSHP09668 335 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 SELPP16109 830 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 SFPQP23246 707 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 EIF4BP23588 611 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 GTF2BQ00403 316 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 MGAT3Q09327 533 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 STX1AQ16623 288 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 MAPK6Q16659 721 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 TRIM71Q2Q1W2 868 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ZNF618Q5T7W0 954 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 GUF1Q8N442 669 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 USP38Q8NB14 1042 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 MLKLQ8NB16 471 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 TMEM161BQ8NDZ6 487 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ZNF507Q8TCN5 953 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 DHX38Q92620 1227 aaKnown RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 KCNN1Q92952 543 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 WNT8BQ93098 351 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 HPS3Q969F9 1004 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ACCSQ96QU6 501 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 FIZ1Q96SL8 496 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 OSMRQ99650 979 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ADAMTS10Q9H324 1103 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 HIPK3Q9H422 1215 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 PRMT7Q9NVM4 692 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ARHGAP28Q9P2N2 729 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms