RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TSPAN1O60635 241 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 FGF18O76093 207 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 EOMESO95936 686 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 SRGAP2CP0DJJ0 459 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 LAG3P18627 525 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 RPA1P27694 616 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 PBX3P40426 434 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 PTENP60484 403 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 MBTD1Q05BQ5 628 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 PTGDRQ13258 359 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 IL17AQ16552 155 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 AAK1Q2M2I8 961 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 CTC1Q2NKJ3 1217 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
SHMT2-224ENST00000556737 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 IGSF22Q8N9C0 903 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 RNF169Q8NCN4 708 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 LPPQ93052 612 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 PABPC5Q96DU9 382 aaKnown RBP11.49□□□□□ -0.57
SHMT2-224ENST00000556737 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
SHMT2-224ENST00000556737 UHRF1Q96T88 793 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-224ENST00000556737 POLR3FQ9H1D9 316 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-224ENST00000556737 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 FAM105AQ9NUU6 356 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 KIF3AQ9Y496 699 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 MYO7AQ13402 2215 aa11.49□□□□□ -0.57
SHMT2-224ENST00000556737 FSCN2O14926 492 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 ASAP2O43150 1006 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 KCNA5P22460 613 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 LTBRP36941 435 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 RAB27AP51159 221 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 UBE3AQ05086 875 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 CUL4AQ13619 759 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 HAUS3Q68CZ6 603 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 CDCA2Q69YH5 1023 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-224ENST00000556737 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 PCDHB12Q9Y5F1 795 aa11.48□□□□□ -0.57
SHMT2-224ENST00000556737 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 LINC01565O15544 149 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 B4GALT5O43286 388 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 B4GALT3O60512 393 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ZNF623O75123 536 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 TBX10O75333 385 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 MUTP22033 750 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 PRPHP41219 470 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 TFDP1Q14186 410 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 RILPL1Q5EBL4 403 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 KCNT2Q6UVM3 1135 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ABI1Q8IZP0 508 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 SLC39A11Q8N1S5 342 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ZNF558Q96NG5 402 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 NACC1Q96RE7 527 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 MMTAG2Q9BU76 263 aaKnown RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 MRPL9Q9BYD2 267 aaKnown RBP11.47□□□□□ -0.57
SHMT2-224ENST00000556737 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 LRWD1Q9UFC0 647 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 LZTS1Q9Y250 596 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 PCDHB2Q9Y5E7 798 aa11.47□□□□□ -0.57
SHMT2-224ENST00000556737 ARHGEF35A5YM69 484 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 H3BQ06 376 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 LAD1O00515 517 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 OFD1O75665 1012 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 ERLIN2O94905 339 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 GLP2RO95838 553 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 SKIP12755 728 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 ERVFC1P60507 584 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 DLX2Q07687 328 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 PDIA5Q14554 519 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 PCBP1Q15365 356 aaKnown RBP eCLIP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 MCTP1Q6DN14 999 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 TMEM173Q86WV6 379 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 MCPH1Q8NEM0 835 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 SNX29Q8TEQ0 813 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms