RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 H3BNC9 293 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 INO80B-WBP1J3KQ70 363 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 GRM6O15303 877 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 ASAP2O43150 1006 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 B4GALT5O43286 388 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 TSPAN1O60635 241 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 XRCC6P12956 609 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNX6-208ENST00000556712 POU3F3P20264 500 aaPredicted RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 MUTP22033 750 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 PTENP60484 403 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 TFDP1Q14186 410 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 MXD4Q14582 209 aaPredicted RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 UBXN11Q5T124 520 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 SPOUT1Q5T280 376 aaKnown RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 LRRC55Q6ZSA7 311 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 MCPH1Q8NEM0 835 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 FOXD4L4Q8WXT5 416 aaPredicted RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 KIFC3Q9BVG8 833 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
SNX6-208ENST00000556712 CHST12Q9NRB3 414 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 CLIC4Q9Y696 253 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 STX6O43752 255 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 ERLIN2O94905 339 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 EYA4O95677 639 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 EDN1P05305 212 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 ITGB1P05556 798 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 CYP11B2P19099 503 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 PBX3P40426 434 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 CEBPZQ03701 1054 aaKnown RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 AMHR2Q16671 573 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 ARL6IP4Q66PJ3 421 aaKnown RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 CDR2LQ86X02 465 aaPredicted RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 COLGALT1Q8NBJ5 622 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 LRRC15Q8TF66 581 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 C11orf84Q9BUA3 381 aaPredicted RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 RUSC1Q9BVN2 902 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 EIF2AQ9BY44 585 aaKnown RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 CWH43Q9H720 699 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 TYW1Q9NV66 732 aaKnown RBP11.5□□□□□ -0.57
SNX6-208ENST00000556712 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
SNX6-208ENST00000556712 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNX6-208ENST00000556712 ARF4P18085 180 aaPredicted RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 LIG1P18858 919 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 DNAJB1P25685 340 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 MARCKSP29966 332 aaPredicted RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 TFF2Q03403 129 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 PTPAQ15257 358 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 PTPROQ16827 1216 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 HYIQ5T013 277 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 FAM43BQ6ZT52 329 aaPredicted RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 CABP7Q86V35 215 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 LRRC43Q8N309 656 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
SNX6-208ENST00000556712 PLVAPQ9BX97 442 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 PLAGL2Q9UPG8 496 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 PCDHB2Q9Y5E7 798 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 PCDHGC5Q9Y5F6 944 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
SNX6-208ENST00000556712 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
SNX6-208ENST00000556712 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 HOXA2O43364 376 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 HIP1RO75146 1068 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 RB1P06400 928 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
SNX6-208ENST00000556712 IRS1P35568 1242 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 RAB27AP51159 221 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 AFF1P51825 1210 aaKnown RBP11.48□□□□□ -0.57
SNX6-208ENST00000556712 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 CAMK1Q14012 370 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 KARSQ15046 597 aaKnown RBP11.48□□□□□ -0.57
SNX6-208ENST00000556712 TMEM119Q4V9L6 283 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 TCEAL5Q5H9L2 206 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 DAW1Q8N136 415 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 SMG8Q8ND04 991 aaKnown RBP11.48□□□□□ -0.57
SNX6-208ENST00000556712 POF1BQ8WVV4 589 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 P2RX5Q93086 422 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 USP28Q96RU2 1077 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 TRAIPQ9BWF2 469 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 APOL6Q9BWW8 343 aa11.48□□□□□ -0.57
SNX6-208ENST00000556712 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms