RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ITGA1P56199 1179 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 MCL1Q07820 350 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 RAPGEF1Q13905 1077 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 HABP4Q5JVS0 413 aaKnown RBP6.17□□□□□ -1.42
SRP54-211ENST00000556445 FAM209AQ5JX71 171 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 CYP4F22Q6NT55 531 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 SCUBE1Q8IWY4 988 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 IFNL3Q8IZI9 196 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 JMYQ8N9B5 988 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 KYQ8NBH2 561 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 PHOSPHO1Q8TCT1 267 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 PAGR1Q9BTK6 254 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 INO80BQ9C086 356 aaPredicted RBP6.17□□□□□ -1.42
SRP54-211ENST00000556445 SMOC1Q9H4F8 434 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 SLC6A20Q9NP91 592 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 DTLQ9NZJ0 730 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 MYOTQ9UBF9 498 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 ASH2LQ9UBL3 628 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 DDX19BQ9UMR2 479 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 NPHP3Q7Z494 1330 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 KIAA0232Q92628 1395 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 PLEKHG2Q9H7P9 1386 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 SLIT3O75094 1523 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 TRBV23-1A0A0A0MS06 115 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 LRG1P02750 347 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 C6orf222P0C671 652 aaPredicted RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 CNGA1P29973 690 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 MVPQ14764 893 aaKnown RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 TCEA2Q15560 299 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 C2orf27AQ580R0 203 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 C10orf62Q5T681 223 aaPredicted RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 C20orf194Q5TEA3 1177 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 OTOP3Q7RTS5 596 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 KRT28Q7Z3Y7 464 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 C14orf80Q86SX3 495 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 STK32CQ86UX6 486 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 ZDHHC14Q8IZN3 488 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 API5Q9BZZ5 524 aaKnown RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 RWDD1Q9H446 243 aaPredicted RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 NGRNQ9NPE2 291 aaKnown RBP6.16□□□□□ -1.42
SRP54-211ENST00000556445 NTMQ9P121 344 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 PLAAQ9Y263 795 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 TRAF6Q9Y4K3 522 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 USP19O94966 1318 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 KDM2BQ8NHM5 1336 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 TMEM94Q12767 1356 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 LTN1O94822 1766 aa6.16□□□□□ -1.42
SRP54-211ENST00000556445 NFAT5O94916 1531 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 ABCC6O95255 1503 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 KRIT1O00522 736 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 CHL1O00533 1208 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 GCP02774 474 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
SRP54-211ENST00000556445 SUMO1P63165 101 aaKnown RBP6.15□□□□□ -1.42
SRP54-211ENST00000556445 NKX3-2P78367 333 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 ADAM9Q13443 819 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 TWISTNBQ3B726 338 aaPredicted RBP6.15□□□□□ -1.42
SRP54-211ENST00000556445 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 PRR31Q5SQ13 230 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 FRMD5Q7Z6J6 570 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 THNSL2Q86YJ6 484 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 MYO1HQ8N1T3 1032 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 SYNPOQ8N3V7 929 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 TTLL6Q8N841 843 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 TOE1Q96GM8 510 aaKnown RBP6.15□□□□□ -1.42
SRP54-211ENST00000556445 ORAI2Q96SN7 254 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 YIPF4Q9BSR8 244 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 WASF3Q9UPY6 502 aa6.15□□□□□ -1.42
SRP54-211ENST00000556445 TRPM3Q9HCF6 1732 aaPredicted RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 SLC27A2O14975 620 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 TBX3O15119 743 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 NOBOXO60393 691 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 MAFKO60675 156 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 SOD2P04179 222 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 COL6A2P12110 1019 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 RPL13P26373 211 aaKnown RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 STAT3P40763 770 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 NFIXQ14938 502 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 LONRF2Q1L5Z9 754 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 PLEKHO1Q53GL0 409 aaPredicted RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 NT5DC1Q5TFE4 455 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 TTLL7Q6ZT98 887 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 MAMDC2Q7Z304 686 aaPredicted RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 ARHGEF25Q86VW2 580 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 ZNF761Q86XN6 746 aaPredicted RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 TTLL11Q8NHH1 800 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 TTC8Q8TAM2 541 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 UHMK1Q8TAS1 419 aaKnown RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 THAP3Q8WTV1 239 aaPredicted RBP6.14□□□□□ -1.43
SRP54-211ENST00000556445 CHAC2Q8WUX2 184 aa6.14□□□□□ -1.43
SRP54-211ENST00000556445 CLEC4DQ8WXI8 215 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms