RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 FMO5P49326 533 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 NR1H3Q13133 447 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM153CQ494X1 144 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 SPDL1Q96EA4 605 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 MYBL2P10244 700 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 GJB7Q6PEY0 223 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 YIPF3Q9GZM5 350 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 GOLGA8SH3BPF8 625 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 PBX1P40424 430 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 AMPD2Q01433 879 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 SEPT14Q6ZU15 432 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 C3orf20Q8ND61 904 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 DDX23Q9BUQ8 820 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 COA1Q9GZY4 146 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 TMEM253P0C7T8 217 aa16.08■□□□□ 0.17
ARHGEF40-207ENST00000556399 KLRK1P26718 216 aa16.08■□□□□ 0.17
ARHGEF40-207ENST00000556399 SLC29A2Q14542 456 aa16.08■□□□□ 0.17
ARHGEF40-207ENST00000556399 WDR59Q6PJI9 974 aa16.08■□□□□ 0.17
ARHGEF40-207ENST00000556399 SPATA20Q8TB22 786 aa16.08■□□□□ 0.17
ARHGEF40-207ENST00000556399 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 IRX4P78413 519 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 GLG1Q92896 1179 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZFP69BQ9UJL9 534 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 TTC7AQ9ULT0 858 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAP3K7O43318 606 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 PDE6BP35913 854 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 GH2P01242 217 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 PDHA1P08559 390 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 POLE2P56282 527 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 PPP2R5DQ14738 602 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 GNPTABQ3T906 1256 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 ATP6V0A1Q93050 837 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 COMMD10Q9Y6G5 202 aa16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 BAZ2BQ9UIF8 2168 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-207ENST00000556399 TULP2O00295 520 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 DIAPH2O60879 1101 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 RTN2O75298 545 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SERPINB6P35237 376 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 HP1BP3Q5SSJ5 553 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 RCCD1A6NED2 376 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SPAG7O75391 227 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TMEM191BP0C7N4 346 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 MIPOL1Q8TD10 442 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TSC22D3Q99576 134 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 GINM1Q9NU53 330 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SMARCA1P28370 1054 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 GPSM2P81274 684 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 CAPRIN2Q6IMN6 1127 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TRMT10CQ7L0Y3 403 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TRIM42Q8IWZ5 723 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 ACTRT1Q8TDG2 376 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SCINQ9Y6U3 715 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 CLRN2A0PK11 232 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 TJP3O95049 919 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 LMNAP02545 664 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SNX16P57768 344 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAP7Q14244 749 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 PITPNM2Q9BZ72 1349 aa16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF335Q9H4Z2 1342 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-207ENST00000556399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 SLC16A4O15374 487 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 GYG2O15488 501 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 TNNC2P02585 160 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 SCTRP47872 440 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 RAD23BP54727 409 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 TTMPQ5BVD1 217 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 PDIK1LQ8N165 341 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAML1Q92585 1016 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 YY1AP1Q9H869 796 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 FGFR1OP2Q9NVK5 253 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms