RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
SLIRP-206ENST00000556375 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
SLIRP-206ENST00000556375 GPRC5CQ9NQ84 441 aa12.79□□□□□ -0.36
SLIRP-206ENST00000556375 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
SLIRP-206ENST00000556375 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
SLIRP-206ENST00000556375 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 SLC26A4O43511 780 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 TSPAN1O60635 241 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 EYA4O95677 639 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 AXLP30530 894 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
SLIRP-206ENST00000556375 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-206ENST00000556375 PTPROQ16827 1216 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-206ENST00000556375 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 ABI1Q8IZP0 508 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 P2RX5Q93086 422 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
SLIRP-206ENST00000556375 CCDC51Q96ER9 411 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 LMAN2LQ9H0V9 348 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-206ENST00000556375 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
SLIRP-206ENST00000556375 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 E9PMD0 336 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 ZNF623O75123 536 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
SLIRP-206ENST00000556375 HOXA11P31270 313 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-206ENST00000556375 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
SLIRP-206ENST00000556375 NAMPTP43490 491 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 AMHR2Q16671 573 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 NOTUMQ6P988 496 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 ZBTB8OSQ8IWT0 167 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 KIFAP3Q92845 792 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
SLIRP-206ENST00000556375 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
SLIRP-206ENST00000556375 MYO7AQ13402 2215 aa12.77□□□□□ -0.37
SLIRP-206ENST00000556375 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 LAG3P18627 525 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PTPAQ15257 358 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 UBXN11Q5T124 520 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 SPOUT1Q5T280 376 aaKnown RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 CABP7Q86V35 215 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 HELQQ8TDG4 1101 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 CWH43Q9H720 699 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
SLIRP-206ENST00000556375 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-206ENST00000556375 TDRD15B5MCY1 1934 aaKnown RBP12.75□□□□□ -0.37
SLIRP-206ENST00000556375 GRM6O15303 877 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-206ENST00000556375 UBA7P41226 1012 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 GRIN1Q05586 938 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 GLB1LQ6UWU2 654 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 MRPL10Q7Z7H8 261 aaKnown RBP12.75□□□□□ -0.37
SLIRP-206ENST00000556375 KLHL23Q8NBE8 558 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 LPPQ93052 612 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 CALML4Q96GE6 196 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 RUSC1Q9BVN2 902 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 PRDM6Q9NQX0 595 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms