RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 RC3H2Q9HBD1 1191 aaKnown RBP12.34□□□□□ -0.43
CHGA-205ENST00000556098 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
CHGA-205ENST00000556098 SMTNL1A8MU46 457 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
CHGA-205ENST00000556098 EYA4O95677 639 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 PDGFBP01127 241 aaPredicted RBP12.33□□□□□ -0.44
CHGA-205ENST00000556098 AVPR2P30518 371 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 ICAM3P32942 547 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 SREBF1P36956 1147 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 UBA7P41226 1012 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 TECP42680 631 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 COASYQ13057 564 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 CALCRLQ16602 461 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 SLFN12Q8IYM2 578 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 INPP4AQ96PE3 977 aaPredicted RBP12.33□□□□□ -0.44
CHGA-205ENST00000556098 GSDMAQ96QA5 445 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 RMND1Q9NWS8 449 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 TRPV2Q9Y5S1 764 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 KDM3AQ9Y4C1 1321 aa12.33□□□□□ -0.44
CHGA-205ENST00000556098 C2orf16Q68DN1 1984 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 TBKBP1A7MCY6 615 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 BECN2A8MW95 431 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 IKBKBO14920 756 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 STAM2O75886 525 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 CYP3A4P08684 503 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 SRGAP2BP0DMP2 458 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 CIITAP33076 1130 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 PPP1R2P41236 205 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 ADAM17P78536 824 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
CHGA-205ENST00000556098 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 IER5Q5VY09 327 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 IGSF22Q8N9C0 903 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 MLKLQ8NB16 471 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
CHGA-205ENST00000556098 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 MTMR9Q96QG7 549 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 STK17AQ9UEE5 414 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 PCDHB7Q9Y5E2 793 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
CHGA-205ENST00000556098 DENND3A2RUS2 1198 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 MEIS2O14770 477 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 ATP9AO75110 1047 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 TPM3P06753 285 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 AMPD3Q01432 767 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 E2F4Q16254 413 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 Q4G0T1 1027 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 SARM1Q6SZW1 724 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.31□□□□□ -0.44
CHGA-205ENST00000556098 RTN4RL1Q86UN2 441 aaPredicted RBP12.31□□□□□ -0.44
CHGA-205ENST00000556098 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 GIMAP8Q8ND71 665 aaPredicted RBP12.31□□□□□ -0.44
CHGA-205ENST00000556098 CRYGNQ8WXF5 182 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
CHGA-205ENST00000556098 FAM20AQ96MK3 541 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 TMEM260Q9NX78 707 aa12.31□□□□□ -0.44
CHGA-205ENST00000556098 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
CHGA-205ENST00000556098 DENND4AQ7Z401 1863 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 GOLGA6L6A8MZA4 724 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 WNT7AO00755 349 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 INSRRP14616 1297 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 STAT6P42226 847 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 SARSP49591 514 aaKnown RBP12.3□□□□□ -0.44
CHGA-205ENST00000556098 ERVFC1P60507 584 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
CHGA-205ENST00000556098 GRIN1Q05586 938 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
CHGA-205ENST00000556098 PCNX4Q63HM2 1172 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 VN1R2Q8NFZ6 395 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 RASSF8Q8NHQ8 419 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 ASIC4Q96FT7 647 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 DNAJC25Q9H1X3 360 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 MFSD1Q9H3U5 465 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
CHGA-205ENST00000556098 AAASQ9NRG9 546 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms