RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TRIM59Q8IWR1 403 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 SMAP1Q8IYB5 467 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ANKRD13AQ8IZ07 590 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ZNF397Q8NF99 534 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 CPLX3Q8WVH0 158 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ZNF837Q96EG3 531 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 LXNQ9BS40 222 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 STRA6Q9BX79 667 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 FGFBP2Q9BYJ0 223 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ST6GALNAC4Q9H4F1 302 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 HOMER2Q9NSB8 354 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 TYW1Q9NV66 732 aaKnown RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 KCNH4Q9UQ05 1017 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 SIK3Q9Y2K2 1263 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 PFASO15067 1338 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 RLFQ13129 1914 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 ARHGEF35A5YM69 484 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 WDR64B1ANS9 1081 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CHMP2AO43633 222 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 EIF3JO75822 258 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 RHOQP17081 205 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 TRIM21P19474 475 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 EPHX2P34913 555 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 COPB2P35606 906 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 SCTRP47872 440 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CASP5P51878 434 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 SNRPFP62306 86 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 PPIL2Q13356 520 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 ADAM9Q13443 819 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 TOGARAM2Q6ZUX3 1019 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CCDC170Q8IYT3 715 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 GOLGA5Q8TBA6 731 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 SYN2Q92777 582 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CDCA5Q96FF9 252 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 FIZ1Q96SL8 496 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 MKNK1Q9BUB5 465 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 MOV10L1Q9BXT6 1211 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 MRPL44Q9H9J2 332 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 ZNHIT6Q9NWK9 470 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CUEDC1Q9NWM3 386 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 TBC1D7Q9P0N9 293 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
ATXN3-235ENST00000556082 TCEAL9Q9UHQ7 104 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 FZD1Q9UP38 647 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 PHIPQ8WWQ0 1821 aa9.12□□□□□ -0.95
ATXN3-235ENST00000556082 UQCRHLA0A096LP55 91 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 GLTPD2A6NH11 291 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 SOWAHDA6NJG2 315 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 RSPH10B2B2RC85 870 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 ZBTB39O15060 712 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 ATP9AO75110 1047 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 CCNE2O96020 404 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 UQCRHP07919 91 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 RSPH10BP0C881 870 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 MYCLP12524 364 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 KCNA2P16389 499 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 RARRES1P49788 294 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 ERVK-24P63145 666 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 RAD51AP2Q09MP3 1159 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 POU4F2Q12837 409 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 MAPK7Q13164 816 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 DBN1Q16643 649 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 GNPTABQ3T906 1256 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 CCDC40Q4G0X9 1142 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 LDLRAD1Q5T700 205 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 RIPOR1Q6ZS17 1223 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 FASTKD5Q7L8L6 764 aaKnown RBP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 TAS1R3Q7RTX0 852 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 PNMA8AQ86V59 439 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 SLC9A9Q8IVB4 645 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 NELFCDQ8IXH7 590 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 DAW1Q8N136 415 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 DMAC2Q9NW81 257 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 LARSQ9P2J5 1176 aaKnown RBP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 PLAGL2Q9UPG8 496 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 PCDHA10Q9Y5I2 948 aa9.11□□□□□ -0.95
ATXN3-235ENST00000556082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 EPN1Q9Y6I3 576 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-235ENST00000556082 PARP14Q460N5 1801 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 GTPBP10A4D1E9 387 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 IQCA1LA6NCM1 817 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 PES1O00541 588 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 TGFB1I1O43294 461 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms