RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 SKIP12755 728 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 HOXB8P17481 243 aaPredicted RBP27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 ZXDAP98168 799 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 EARS2Q5JPH6 523 aaKnown RBP27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 GLB1LQ6UWU2 654 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 TMEM173Q86WV6 379 aaPredicted RBP27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 PRPF31Q8WWY3 499 aaKnown RBP27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 TMEM143Q96AN5 459 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 BMP2KQ9NSY1 1161 aaPredicted RBP27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 TBC1D13Q9NVG8 400 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 INPP5FQ9Y2H2 1132 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 ZNF318Q5VUA4 2279 aa27.35■■□□□ 1.97
PPP4R4-204ENST00000555690 TMEM221A6NGB7 291 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 M0R296 226 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 TBX3O15119 743 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 ZNF623O75123 536 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 CXCL14O95715 111 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 SRGAP2CP0DJJ0 459 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 RAB27AP51159 221 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 POLGP54098 1239 aaPredicted RBP27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 EPHA7Q15375 998 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 NOMO2Q5JPE7 1267 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 POTEDQ86YR6 584 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 VPS52Q8N1B4 723 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 CASP10Q92851 521 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 LXNQ9BS40 222 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 DHX33Q9H6R0 707 aaKnown RBP27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 RGL1Q9NZL6 768 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 ORC3Q9UBD5 711 aaPredicted RBP27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 CDH22Q9UJ99 828 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 HCFC2Q9Y5Z7 792 aa27.34■■□□□ 1.97
PPP4R4-204ENST00000555690 FAM205CA6NFA0 338 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 CLASP2O75122 1294 aaKnown RBP27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 OFD1O75665 1012 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 SP100P23497 879 aaPredicted RBP27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 NCAPH2Q6IBW4 605 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 EXOC8Q8IYI6 725 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 PBXIP1Q96AQ6 731 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 NAP1L4Q99733 375 aaKnown RBP27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 KCNH6Q9H252 994 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 NRDE2Q9H7Z3 1164 aa27.33■■□□□ 1.97
PPP4R4-204ENST00000555690 YWHABP31946 246 aaKnown RBP27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 AK2P54819 239 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 BMS1Q14692 1282 aaKnown RBP27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 ALYREFQ86V81 257 aaKnown RBP27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 C4orf19Q8IY42 314 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 PSPC1Q8WXF1 523 aaKnown RBP27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 AUTS2Q8WXX7 1259 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 IGSF21Q96ID5 467 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 DYDC2Q96IM9 177 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 GBP3Q9H0R5 595 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 MINDY3Q9H8M7 445 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 AGPAT5Q9NUQ2 364 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 PPME1Q9Y570 386 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 PCDHB2Q9Y5E7 798 aa27.32■■□□□ 1.96
PPP4R4-204ENST00000555690 ZBTB39O15060 712 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 GALTP07902 379 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 RFC5P40937 340 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 RNASELQ05823 741 aaKnown RBP27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 LAMTOR4Q0VGL1 99 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 NR5A1Q13285 461 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 CTTNQ14247 550 aaKnown RBP27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 TPRNQ4KMQ1 711 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 BMP8AQ7Z5Y6 402 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 BCL7CQ8WUZ0 217 aaPredicted RBP27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 ZBP1Q9H171 429 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 DNAJB4Q9UDY4 337 aa27.31■■□□□ 1.96
PPP4R4-204ENST00000555690 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 FDPSP14324 419 aaKnown RBP27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 CYP4A11Q02928 519 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 SPIRE1Q08AE8 756 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 XKR9Q5GH70 373 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 OTUD6AQ7L8S5 288 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 SRGAP1Q7Z6B7 1085 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 DDX53Q86TM3 631 aaKnown RBP27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 NECAB1Q8N987 351 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 WASF1Q92558 559 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 PGBD4Q96DM1 585 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 ZSWIM4Q9H7M6 989 aa27.3■■□□□ 1.96
PPP4R4-204ENST00000555690 B4GALT3O60512 393 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 BAG4O95429 457 aaKnown RBP27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 HOXA11P31270 313 aaPredicted RBP27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 ANAPC15P60006 121 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 NHLH1Q02575 133 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 EMC2Q15006 297 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 ANKRD1Q15327 319 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 AGMOQ6ZNB7 445 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 ZNF280BQ86YH2 543 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 SLFN12Q8IYM2 578 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 TMEM87AQ8NBN3 555 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 ADAM7Q9H2U9 754 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 TSHZ2Q9NRE2 1034 aa27.29■■□□□ 1.96
PPP4R4-204ENST00000555690 CARNS1A5YM72 827 aa27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 KRT2P35908 639 aa27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 SLC11A1P49279 550 aa27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 ITIH3Q06033 890 aa27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 CES5AQ6NT32 575 aa27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 MRPL10Q7Z7H8 261 aaKnown RBP27.28■■□□□ 1.96
PPP4R4-204ENST00000555690 FERMT3Q86UX7 667 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms