RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
TUBB3-209ENST00000555609 TMX2Q9Y320 296 aa17.51■□□□□ 0.39
TUBB3-209ENST00000555609 SYNGAP1Q96PV0 1343 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 LIG3P49916 1009 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CACNB3P54284 484 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 DHX9Q08211 1270 aaKnown RBP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 SHROOM1Q2M3G4 852 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CBWD6Q4V339 395 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 ZC2HC1CQ53FD0 456 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CBWD3Q5JTY5 395 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CBWD5Q5RIA9 395 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 FAM160B2Q86V87 743 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 DDX42Q86XP3 938 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CNPY4Q8N129 248 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 DBNDD1Q9H9R9 158 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 PARP2Q9UGN5 583 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 PPP1R9AQ9ULJ8 1098 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 LOXHD1Q8IVV2 1947 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 PODXLO00592 558 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 TRAPPC3O43617 180 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 EXOC3O60645 756 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 MTA2O94776 668 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 NUDT17P0C025 328 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 CHRNA3P32297 505 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 DR1Q01658 176 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 SLC17A8Q8NDX2 589 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 LMO3Q8TAP4 145 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 IPO4Q8TEX9 1081 aaKnown RBP17.5■□□□□ 0.39
TUBB3-209ENST00000555609 P3H4Q92791 437 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 TIPINQ9BVW5 301 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 OSGEPQ9NPF4 335 aa17.5■□□□□ 0.39
TUBB3-209ENST00000555609 C5orf60A6NFR6 353 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 E7EVH7 732 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 ECE2O60344 883 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 CYP2J2P51589 502 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 ODF2Q5BJF6 829 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 C6orf89Q6UWU4 347 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 NIPA1Q7RTP0 329 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 TAX1BP1Q86VP1 789 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 SYCP3Q8IZU3 236 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 TLCD1Q96CP7 247 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 ZNF577Q9BSK1 485 aa17.49■□□□□ 0.39
TUBB3-209ENST00000555609 ACTR5Q9H9F9 607 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-209ENST00000555609 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 CFBP00751 764 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 GZMAP12544 262 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 GPC5P78333 572 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
TUBB3-209ENST00000555609 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 ACCSQ96QU6 501 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 IWS1Q96ST2 819 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 CEP89Q96ST8 783 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
TUBB3-209ENST00000555609 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
TUBB3-209ENST00000555609 DBR1Q9UK59 544 aaKnown RBP17.48■□□□□ 0.39
TUBB3-209ENST00000555609 PHF2O75151 1096 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 POLD1P28340 1107 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
TUBB3-209ENST00000555609 FNTAP49354 379 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 KIAA1755Q5JYT7 1200 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 DCAF12L1Q5VU92 463 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 DNAAF5Q86Y56 855 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 CYFIP2Q96F07 1278 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 PSMD1Q99460 953 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 ST6GALNAC4Q9H4F1 302 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 RABEP2Q9H5N1 569 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 ZDHHC18Q9NUE0 388 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
TUBB3-209ENST00000555609 ZNF536O15090 1300 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 FOXN3O00409 490 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-209ENST00000555609 RTN2O75298 545 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 VCAM1P19320 739 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 IFFO1Q0D2I5 559 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 MAPK7Q13164 816 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 COG2Q14746 738 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 TNIP1Q15025 636 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 PHLDB3Q6NSJ2 640 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 ARHGEF26Q96DR7 871 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 MXRA8Q9BRK3 442 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 TMEM109Q9BVC6 243 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 THAP2Q9H0W7 228 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 WNT8AQ9H1J5 351 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 PABPC3Q9H361 631 aaKnown RBP17.47■□□□□ 0.39
TUBB3-209ENST00000555609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
TUBB3-209ENST00000555609 NOVA2Q9UNW9 492 aaKnown RBP17.47■□□□□ 0.39
TUBB3-209ENST00000555609 ALG6Q9Y672 507 aa17.47■□□□□ 0.39
TUBB3-209ENST00000555609 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 CHMP2AO43633 222 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 HIP1RO75146 1068 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 LYPLA2O95372 231 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms