RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 KATNAL1Q9BW62 490 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 STRA6Q9BX79 667 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 GBP3Q9H0R5 595 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 UPF3AQ9H1J1 476 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 VPS16Q9H269 839 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 ST6GALNAC4Q9H4F1 302 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 XPNPEP3Q9NQH7 507 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TAB2Q9NYJ8 693 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 LIMA1Q9UHB6 759 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 EXOC7Q9UPT5 735 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TRAF3IP3Q9Y228 551 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 EVPLQ92817 2033 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 ZMYM2Q9UBW7 1377 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 IGKV6-21A0A0C4DH24 114 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PES1O00541 588 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 ASAP2O43150 1006 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 TGFB1I1O43294 461 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 NR3C1P04150 777 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PTMAP06454 111 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 SRGAP2CP0DJJ0 459 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 SMIM10L2AP0DMW4 78 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 SMIM10L2BP0DMW5 78 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 NR2F2P24468 414 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 TMOD1P28289 359 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 ABCD1P33897 745 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 CLCN3P51790 818 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 COPB1P53618 953 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 LAMTOR4Q0VGL1 99 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 STRN3Q13033 797 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 DRP2Q13474 957 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 CAPSQ13938 189 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 TFDP1Q14186 410 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 MXD4Q14582 209 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 KRT31Q15323 416 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 FILIP1Q7Z7B0 1213 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 IRF2BP1Q8IU81 584 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 RHPN2Q8IUC4 686 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 GOLGA5Q8TBA6 731 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PPP1R13LQ8WUF5 828 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 BICD1Q96G01 975 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PDLIM2Q96JY6 352 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 NTPCRQ9BSD7 190 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 MTG1Q9BT17 334 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 IKZF4Q9H2S9 585 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 SETD4Q9NVD3 440 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 DDX20Q9UHI6 824 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 TBX20Q9UMR3 447 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 AKT3Q9Y243 479 aa10.6□□□□□ -0.71
HNRNPC-220ENST00000555585 ADGRA3Q8IWK6 1321 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 K7ERI5 159 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 HAS3O00219 553 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 N4BP3O15049 544 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 GNA14O95837 355 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 PRKCSHP14314 528 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 CDC25BP30305 580 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 CYP2J2P51589 502 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 CEP135Q66GS9 1140 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 LRRC55Q6ZSA7 311 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 MAP4K3Q8IVH8 894 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 ZBTB8OSQ8IWT0 167 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 C7orf31Q8N865 590 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 TUBGCP2Q9BSJ2 902 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 AGPAT3Q9NRZ7 376 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 CGNQ9P2M7 1197 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
HNRNPC-220ENST00000555585 NRCAMQ92823 1304 aa10.58□□□□□ -0.71
HNRNPC-220ENST00000555585 SIP14410 1827 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 A0A1B0GTH6 734 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 GOLGA6L6A8MZA4 724 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 MSCO60682 206 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 ADAMTS4O75173 837 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 GJB1P08034 283 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 GNAT1P11488 350 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 SCP2P22307 547 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 EFNA5P52803 228 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 SNRPFP62306 86 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 NKX3-2P78367 333 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 KCNA10Q16322 511 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 NFIL3Q16649 462 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 MARCH8Q5T0T0 291 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 ARMCX5Q6P1M9 558 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 NFRKBQ6P4R8 1299 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 CXCL17Q6UXB2 119 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 TMC6Q7Z403 805 aa10.58□□□□□ -0.72
HNRNPC-220ENST00000555585 RNF180Q86T96 592 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms