RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KCNJ18B7U540 433 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 ANKRD63C9JTQ0 380 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 K7ERI5 159 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.62
SRP54-208ENST00000555557 MSCO60682 206 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.62
SRP54-208ENST00000555557 SERPINC1P01008 464 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 CYP2C9P11712 490 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 NR2F2P24468 414 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 TMOD1P28289 359 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.62
SRP54-208ENST00000555557 KCNJ12Q14500 433 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 PTPN21Q16825 1174 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 FAM47CQ5HY64 1035 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 LRRC55Q6ZSA7 311 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.62
SRP54-208ENST00000555557 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.62
SRP54-208ENST00000555557 DEFB118Q96PH6 123 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 THAP9Q9H5L6 903 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 TMEM206Q9H813 350 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 AGPAT3Q9NRZ7 376 aa11.21□□□□□ -0.62
SRP54-208ENST00000555557 GRIN2DO15399 1336 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 A0A087WZ62 844 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
SRP54-208ENST00000555557 EDN1P05305 212 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 ACLYP53396 1101 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 UBASH3AP57075 661 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 ALCAMQ13740 583 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 TCP11X2Q5H9J9 407 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 SARM1Q6SZW1 724 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
SRP54-208ENST00000555557 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 FDXACB1Q9BRP7 624 aaPredicted RBP11.2□□□□□ -0.62
SRP54-208ENST00000555557 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
SRP54-208ENST00000555557 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 PCIF1Q9H4Z3 704 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 GINS2Q9Y248 185 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 UBE4BO95155 1302 aa11.2□□□□□ -0.62
SRP54-208ENST00000555557 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 NR3C1P04150 777 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CCL5P13501 91 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CASP4P49662 377 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CYP2J2P51589 502 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 ZNF75DP51815 510 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 KRT31Q15323 416 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 EDRF1Q3B7T1 1238 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CEP135Q66GS9 1140 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 GDF6Q6KF10 455 aaPredicted RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 HS2ST1Q7LGA3 356 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 APTXQ7Z2E3 356 aaKnown RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 CNOT6LQ96LI5 555 aaKnown RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 MINDY3Q9H8M7 445 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 IFT122Q9HBG6 1241 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 PAK6Q9NQU5 681 aaPredicted RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 KCNG1Q9UIX4 513 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 EVPLQ92817 2033 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CETN3O15182 167 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 ASAP2O43150 1006 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 IQCF3P0C7M6 154 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 ADSSP30520 456 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 HOXC8P31273 242 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 STRN3Q13033 797 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 TFDP1Q14186 410 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 KIZQ2M2Z5 673 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CDCA2Q69YH5 1023 aaPredicted RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 FOXR2Q6PJQ5 311 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 RDH13Q8NBN7 331 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 BICD1Q96G01 975 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 INO80BQ9C086 356 aaPredicted RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 VPS16Q9H269 839 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
SRP54-208ENST00000555557 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
SRP54-208ENST00000555557 SMIM35A0A1B0GVV1 85 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 H0YCG3 227 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 HNRNPDLO14979 420 aaKnown RBP11.18□□□□□ -0.62
SRP54-208ENST00000555557 AKAP3O75969 853 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 GNAT1P11488 350 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 GPC3P51654 580 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 PTENP60484 403 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 ITGA7Q13683 1181 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 ARMCX5Q6P1M9 558 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 ZBTB8OSQ8IWT0 167 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 ZC3H3Q8IXZ2 948 aaKnown RBP11.18□□□□□ -0.62
SRP54-208ENST00000555557 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms