RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 DGAT1O75907 488 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 ERLIN2O94905 339 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 OR52Z1P0C646 297 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 SSTR3P32745 418 aaPredicted RBP27.23■■□□□ 1.95
PRKCH-216ENST00000555542 PBX3P40426 434 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 TECP42680 631 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 KRT17Q04695 432 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 TFDP1Q14186 410 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 MXD4Q14582 209 aaPredicted RBP27.23■■□□□ 1.95
PRKCH-216ENST00000555542 CTC1Q2NKJ3 1217 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 NOSTRINQ8IVI9 506 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 PIGOQ8TEQ8 1089 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 LPPQ93052 612 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 TRAIPQ9BWF2 469 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 TLE6Q9H808 572 aa27.23■■□□□ 1.95
PRKCH-216ENST00000555542 LTBRP36941 435 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 DLX2Q07687 328 aaPredicted RBP27.22■■□□□ 1.95
PRKCH-216ENST00000555542 ORC2Q13416 577 aaPredicted RBP27.22■■□□□ 1.95
PRKCH-216ENST00000555542 GLB1LQ6UWU2 654 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 ERMNQ8TAM6 284 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 MRPS27Q92552 414 aaKnown RBP27.22■■□□□ 1.95
PRKCH-216ENST00000555542 PGBD4Q96DM1 585 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 ENTPD7Q9NQZ7 604 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 INPP5FQ9Y2H2 1132 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 KIF3AQ9Y496 699 aa27.22■■□□□ 1.95
PRKCH-216ENST00000555542 MUC3AQ02505 3323 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 TBX10O75333 385 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 RARRES1P49788 294 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 PLPP4Q5VZY2 271 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 PDE12Q6L8Q7 609 aaKnown RBP27.21■■□□□ 1.95
PRKCH-216ENST00000555542 FAM178BQ8IXR5 827 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 MINDY3Q9H8M7 445 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 TUFT1Q9NNX1 390 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 XPNPEP1Q9NQW7 623 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 SPG21Q9NZD8 308 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 LZTS1Q9Y250 596 aa27.21■■□□□ 1.95
PRKCH-216ENST00000555542 A0A087WWV3 80 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 USO1O60763 962 aaKnown RBP27.2■■□□□ 1.94
PRKCH-216ENST00000555542 ALDH7A1P49419 539 aaKnown RBP27.2■■□□□ 1.94
PRKCH-216ENST00000555542 ERVFC1P60507 584 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 PLCB3Q01970 1234 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 RNASELQ05823 741 aaKnown RBP27.2■■□□□ 1.94
PRKCH-216ENST00000555542 ADAM15Q13444 863 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 EFHBQ8N7U6 833 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 RSPH1Q8WYR4 309 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 TCF25Q9BQ70 676 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 CD207Q9UJ71 328 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 PCDHB2Q9Y5E7 798 aa27.2■■□□□ 1.94
PRKCH-216ENST00000555542 INO80B-WBP1J3KQ70 363 aa27.19■■□□□ 1.94
PRKCH-216ENST00000555542 PER2O15055 1255 aa27.19■■□□□ 1.94
PRKCH-216ENST00000555542 ZC3H11AO75152 810 aaKnown RBP eCLIP27.19■■□□□ 1.94
PRKCH-216ENST00000555542 TRAPPC10P48553 1259 aa27.19■■□□□ 1.94
PRKCH-216ENST00000555542 NCBP1Q09161 790 aaKnown RBP27.19■■□□□ 1.94
PRKCH-216ENST00000555542 CATSPER3Q86XQ3 398 aa27.19■■□□□ 1.94
PRKCH-216ENST00000555542 GJD3Q8N144 294 aa27.19■■□□□ 1.94
PRKCH-216ENST00000555542 XRCC6P12956 609 aaKnown RBP eCLIP27.18■■□□□ 1.94
PRKCH-216ENST00000555542 CA8P35219 290 aa27.18■■□□□ 1.94
PRKCH-216ENST00000555542 BCAR1P56945 870 aa27.18■■□□□ 1.94
PRKCH-216ENST00000555542 NOMO2Q5JPE7 1267 aa27.18■■□□□ 1.94
PRKCH-216ENST00000555542 MAEAQ7L5Y9 396 aa27.18■■□□□ 1.94
PRKCH-216ENST00000555542 URGCPQ8TCY9 931 aa27.18■■□□□ 1.94
PRKCH-216ENST00000555542 POLR3FQ9H1D9 316 aaPredicted RBP27.18■■□□□ 1.94
PRKCH-216ENST00000555542 FSD2A1L4K1 749 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 ZNF623O75123 536 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 MED24O75448 989 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 SPATA31C1P0DKV0 1188 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 PTENP60484 403 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 SMAD4Q13485 552 aaKnown RBP27.17■■□□□ 1.94
PRKCH-216ENST00000555542 NBR1Q14596 966 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 HAUS3Q68CZ6 603 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 TMC7Q7Z402 723 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 SLC39A11Q8N1S5 342 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 ASAP3Q8TDY4 903 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 TMEM169Q96HH4 297 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 NACC1Q96RE7 527 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 GBP3Q9H0R5 595 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 NCOR1O75376 2440 aa27.17■■□□□ 1.94
PRKCH-216ENST00000555542 MEIS3P2A8K0S8 358 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 NT5C1B-RDH14C9J2C7 533 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 MBTPS2O43462 519 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 CAPSQ13938 189 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 PCBP1Q15365 356 aaKnown RBP eCLIP27.16■■□□□ 1.94
PRKCH-216ENST00000555542 MCTP1Q6DN14 999 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 POTEGQ6S5H5 508 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 CDCA3Q99618 268 aaPredicted RBP27.16■■□□□ 1.94
PRKCH-216ENST00000555542 POLR3CQ9BUI4 534 aaPredicted RBP27.16■■□□□ 1.94
PRKCH-216ENST00000555542 C1QTNF1Q9BXJ1 281 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 NGRNQ9NPE2 291 aaKnown RBP27.16■■□□□ 1.94
PRKCH-216ENST00000555542 CD320Q9NPF0 282 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 TBC1D13Q9NVG8 400 aa27.16■■□□□ 1.94
PRKCH-216ENST00000555542 BARX2Q9UMQ3 279 aaPredicted RBP27.16■■□□□ 1.94
PRKCH-216ENST00000555542 FSCN2O14926 492 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 TSPAN1O60635 241 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 OFD1O75665 1012 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 SRGAP2BP0DMP2 458 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 AXLP30530 894 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 HOXA11P31270 313 aaPredicted RBP27.15■■□□□ 1.94
PRKCH-216ENST00000555542 ARL2P36404 184 aa27.15■■□□□ 1.94
PRKCH-216ENST00000555542 BMS1Q14692 1282 aaKnown RBP27.15■■□□□ 1.94
PRKCH-216ENST00000555542 NOTUMQ6P988 496 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms