RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PURAQ00577 322 aaKnown RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 ZNF484Q5JVG2 852 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 LMBRD2Q68DH5 695 aaPredicted RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 MTHFD1LQ6UB35 978 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 TMEM161BQ8NDZ6 487 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 TUBGCP2Q9BSJ2 902 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 TBX20Q9UMR3 447 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 C17orf102A2RUQ5 167 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TFRCP02786 760 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 DLATP10515 647 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 HOXD13P35453 343 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TARBP2Q15633 366 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 RUFY4Q6ZNE9 571 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 GLT1D1Q96MS3 346 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 MTG1Q9BT17 334 aaPredicted RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 OLFML3Q9NRN5 406 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TTLL13PA6NNM8 815 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 B4GALT5O43286 388 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TPM3P06753 285 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TRIM49P0CI25 452 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TRIM49CP0CI26 452 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 EHHADHQ08426 723 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 CCDC186Q7Z3E2 898 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 FAM213AQ9BRX8 229 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 FRMD4BQ9Y2L6 1034 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TGFB1I1O43294 461 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 C22orf31O95567 290 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 FGFR1OPO95684 399 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 RPL13P26373 211 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 MAPK6Q16659 721 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 JPH2Q9BR39 696 aaPredicted RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
NEK9-205ENST00000555405 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
NEK9-205ENST00000555405 PRKCBP05771 671 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 ZNF131P52739 623 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 IRF5Q13568 498 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 HIC1Q14526 733 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 ZNF507Q8TCN5 953 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 FIZ1Q96SL8 496 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 SENP6Q9GZR1 1112 aaPredicted RBP11.16□□□□□ -0.62
NEK9-205ENST00000555405 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEK9-205ENST00000555405 MINDY3Q9H8M7 445 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 TRMT13Q9NUP7 481 aaKnown RBP11.16□□□□□ -0.62
NEK9-205ENST00000555405 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
NEK9-205ENST00000555405 EXOC7Q9UPT5 735 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 PTPN22Q9Y2R2 807 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEK9-205ENST00000555405 MAGEB2O15479 319 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 AKAP3O75969 853 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 ERLIN2O94905 339 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 F2P00734 622 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 EPB41P11171 864 aaKnown RBP11.16□□□□□ -0.62
NEK9-205ENST00000555405 LRMPQ12912 555 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 TFDP1Q14186 410 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 CATSPER4Q7RTX7 472 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 IRF2BP1Q8IU81 584 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 FAM186BQ8IYM0 893 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 KCTD10Q9H3F6 313 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 ARL2P36404 184 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 PPP1R2P41236 205 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 GJA9P57773 515 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 LRRC63Q05C16 580 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 SPAG1Q07617 926 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 KIAA0319LQ8IZA0 1049 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 DNAJC5GQ8N7S2 189 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
NEK9-205ENST00000555405 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 STARD7Q9NQZ5 370 aa11.16□□□□□ -0.62
NEK9-205ENST00000555405 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 KBTBD13C9JR72 458 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 THPOP40225 353 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 NAMPTP43490 491 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 MXD4Q14582 209 aaPredicted RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 GDF6Q6KF10 455 aaPredicted RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 POP1Q99575 1024 aaKnown RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 TMEM206Q9H813 350 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 FAM207AQ9NSI2 230 aaPredicted RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 SAGE1Q9NXZ1 904 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 PDXKO00764 312 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms