RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MYO9BQ13459 2157 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 LRRIQ4A6NIV6 560 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 SFI1A8K8P3 1242 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 IKBKBO14920 756 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 MUTP22033 750 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 CD52P31358 61 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 GPC3P51654 580 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 RBL2Q08999 1139 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 LAMTOR4Q0VGL1 99 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 LPIN1Q14693 890 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 GPNMBQ14956 572 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 SHHQ15465 462 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 TCTN1Q2MV58 587 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
PSEN1-213ENST00000555386 HYIQ5T013 277 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 C16orf59Q7L2K0 433 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 NME8Q8N427 588 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 ASAP3Q8TDY4 903 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 TMEM40Q8WWA1 233 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 TCP11Q8WWU5 503 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 RAD54LQ92698 747 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 GDF15Q99988 308 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 BLOC1S4Q9NUP1 217 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 IMPACTQ9P2X3 320 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-213ENST00000555386 COL4A3BPQ9Y5P4 624 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
PSEN1-213ENST00000555386 IGKV6-21A0A0C4DH24 114 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 POLR2DO15514 142 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 CAND2O75155 1236 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 GPR32O75388 356 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RPS6KA5O75582 802 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 FGBP02675 491 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 CYP11B2P19099 503 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RFC2P35250 354 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 SLC12A3P55017 1021 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 GSDMDP57764 484 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 PAK2Q13177 524 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 FAM26DQ5JW98 314 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 FBXO47Q5MNV8 452 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 TMEM240Q5SV17 173 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RINT1Q6NUQ1 792 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RPAINQ86UA6 219 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 EXOC8Q8IYI6 725 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 AOPEPQ8N6M6 819 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RNF149Q8NC42 400 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 MCPH1Q8NEM0 835 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 DBF4BQ8NFT6 615 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 LARP4BQ92615 738 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 IFIH1Q9BYX4 1025 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 AGO3Q9H9G7 860 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 PYCARDQ9ULZ3 195 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
PSEN1-213ENST00000555386 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
PSEN1-213ENST00000555386 UQCRHLA0A096LP55 91 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 RRP9O43818 475 aaKnown RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 HIP1RO75146 1068 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 UQCRHP07919 91 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 GLRA2P23416 452 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 GTF2F1P35269 517 aaKnown RBP eCLIP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CRYBB1P53674 252 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 TSHZ1Q6ZSZ6 1077 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 SYT2Q8N9I0 419 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 BSNDQ8WZ55 320 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 SEPT8Q92599 483 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 VWCEQ96DN2 955 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 ADAMTS10Q9H324 1103 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 KCNH3Q9ULD8 1083 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CCDC169A6NNP5 214 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 INO80B-WBP1J3KQ70 363 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 SLC26A4O43511 780 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 GAS2O43903 313 aaKnown RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 RPLP2P05387 115 aaKnown RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 ACTN1P12814 892 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 ARL2P36404 184 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 PEX3P56589 373 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CAPSQ13938 189 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 IKBKEQ14164 716 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 TFDP1Q14186 410 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 MXD4Q14582 209 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 DPCR1Q3MIW9 517 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 NAALADL2Q58DX5 795 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 PLEKHG4Q58EX7 1191 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CNKSR3Q6P9H4 555 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 PSRC1Q6PGN9 363 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 KRBA2Q6ZNG9 492 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 C1orf186Q6ZWK4 172 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 SV2BQ7L1I2 683 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 TMCO2Q7Z6W1 182 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms