RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 GUF1Q8N442 669 aaKnown RBP11.86□□□□□ -0.51
TDP1-211ENST00000555178 RNF149Q8NC42 400 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 P2RX5Q93086 422 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
TDP1-211ENST00000555178 ADAMTS10Q9H324 1103 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 A0A0U1RQG5 324 aaPredicted RBP11.85□□□□□ -0.51
TDP1-211ENST00000555178 PSMA7O14818 248 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 MAGEB2O15479 319 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 GPC3P51654 580 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 LRRC26Q2I0M4 334 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 TRIM60Q495X7 471 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 CDR2LQ86X02 465 aaPredicted RBP11.85□□□□□ -0.51
TDP1-211ENST00000555178 FAM126BQ8IXS8 530 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
TDP1-211ENST00000555178 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
TDP1-211ENST00000555178 KCTD10Q9H3F6 313 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
TDP1-211ENST00000555178 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
TDP1-211ENST00000555178 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 GOLGA6L19H0YKK7 550 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 IKBKBO14920 756 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 B4GALT5O43286 388 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 PQBP1O60828 265 aaKnown RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 CABYRO75952 493 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 CHRNA1P02708 482 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 CCNE1P24864 410 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 STIM1Q13586 685 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 CENPPQ6IPU0 288 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 SLC39A4Q6P5W5 647 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 DHTKD1Q96HY7 919 aaPredicted RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 OSMRQ99650 979 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 TIPINQ9BVW5 301 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 DENND3A2RUS2 1198 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 ANKRD63C9JTQ0 380 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 CD4P01730 458 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 MAPTP10636 758 aaKnown RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 UBE2Q1Q7Z7E8 422 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 HAPLN2Q9GZV7 340 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 CCDC113Q9H0I3 377 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 ARHGAP28Q9P2N2 729 aa11.84□□□□□ -0.51
TDP1-211ENST00000555178 TNRC18O15417 2968 aaPredicted RBP11.84□□□□□ -0.51
TDP1-211ENST00000555178 RTP1P59025 263 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 TLE2Q04725 743 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 ZNF18P17022 549 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 THPOP40225 353 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 NAMPTP43490 491 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 GTF2BQ00403 316 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 MGAT3Q09327 533 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 GPNMBQ14956 572 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 AMHR2Q16671 573 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.52
TDP1-211ENST00000555178 BMT2Q1RMZ1 405 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 TCP11Q8WWU5 503 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 NLRP7Q8WX94 980 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 PPME1Q9Y570 386 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 CDY2AQ9Y6F7 541 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 ANK1P16157 1881 aa11.83□□□□□ -0.52
TDP1-211ENST00000555178 CLIC2O15247 247 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 EIF3DO15371 548 aaKnown RBP eCLIP11.82□□□□□ -0.52
TDP1-211ENST00000555178 ITGB8P26012 769 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 DNM2P50570 870 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 PTENP60484 403 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 LRRC55Q6ZSA7 311 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 CSGALNACT2Q8N6G5 542 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 DEPTORQ8TB45 409 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 AGO3Q9H9G7 860 aaKnown RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 ATP11BQ9Y2G3 1177 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 TANC1Q9C0D5 1861 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 GNAT1P11488 350 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 MXD4Q14582 209 aaPredicted RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 SNX17Q15036 470 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 TCTN1Q2MV58 587 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms