RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 XDHP47989 1333 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 HOXD10P28358 340 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 SPARCL1Q14515 664 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 NBPF15Q8N660 670 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 EFHBQ8N7U6 833 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 EXOC4Q96A65 974 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 RPAP3Q9H6T3 665 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PCDHA4Q9UN74 947 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 A0A0D9SFI3 127 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PLA2G4BP0C869 781 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 NDUFA8P51970 172 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 GPS1Q13098 491 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ME3Q16798 604 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 C6orf10Q5SRN2 563 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 SYCP2LQ5T4T6 812 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PPP1R2P3Q6NXS1 205 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 HDDC2Q7Z4H3 204 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 HS6ST3Q8IZP7 471 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ALDH18A1P54886 795 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 CYTH1Q15438 398 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ERAP2Q6P179 960 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 DYNLL2Q96FJ2 89 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 MAGEF1Q9HAY2 307 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PARVBQ9HBI1 364 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PCDHA13Q9Y5I0 950 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ADCY9O60503 1353 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 UBE4BO95155 1302 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 FGGP02679 453 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 COPB2P35606 906 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 GLYCTKQ8IVS8 523 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 BMP3P12645 472 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ADD1P35611 737 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 RALGDSQ12967 914 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ANKS6Q68DC2 871 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PKP3Q9Y446 797 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 KPNA7A9QM74 516 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 IL10P22301 178 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ST8SIA6P61647 398 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 CCDC92Q53HC0 331 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 TMEM270Q6UE05 265 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 MARCH10Q8NA82 808 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 FAM129AQ9BZQ8 928 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 USP44Q9H0E7 712 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ALDH1A2O94788 518 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ALDH1A1P00352 501 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 INAQ16352 499 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 RHPN2Q8IUC4 686 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 RNASE11Q8TAA1 199 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 FMO2Q99518 471 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 DDX50Q9BQ39 737 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 POLR3FQ9H1D9 316 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 TMEM206Q9H813 350 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF556Q9HAH1 456 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 CUL7Q14999 1698 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 KRT37O76014 449 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 MAPK9P45984 424 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CRKLP46109 303 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ROR1Q01973 937 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 DYNC1I2Q13409 638 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CUL3Q13618 768 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 EPM2AIP1Q7L775 607 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 HORMAD1Q86X24 394 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 BCL2L12Q9HB09 334 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 MCM8Q9UJA3 840 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SLC25A13Q9UJS0 675 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ANAPC7Q9UJX3 599 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TEX14Q8IWB6 1497 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 PLCG1P19174 1290 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 KCNQ4P56696 695 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SPTLC3Q9NUV7 552 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 RRP15Q9Y3B9 282 aaKnown RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CCDC78A2IDD5 438 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF197O14709 1029 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TBC1D4O60343 1298 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 EPHB4P54760 987 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TNFAIP2Q03169 654 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 FAM182BQ5T319 152 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 COMMD2Q86X83 199 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 RIN3Q8TB24 985 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 TMEM245Q9H330 911 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 ASNSD1Q9NWL6 643 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CYBBP04839 570 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 CEP55Q53EZ4 464 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 SEPT5Q99719 369 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-216ENST00000555002 AATKQ6ZMQ8 1374 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 K7ERI5 159 aa7.29□□□□□ -1.24
SYNE2-216ENST00000555002 GUCY2CP25092 1073 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms