RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 IWS1Q96ST2 819 aa16.85■□□□□ 0.29
SYNE3-203ENST00000554873 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
SYNE3-203ENST00000554873 LMNAP02545 664 aaKnown RBP16.84■□□□□ 0.29
SYNE3-203ENST00000554873 FAM200BP0CF97 657 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 CDK8P49336 464 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 USP11P51784 963 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 INHBCP55103 352 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 PPP4CP60510 307 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 SLC9C1Q4G0N8 1177 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 RNF43Q68DV7 783 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 EYA3Q99504 573 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 EDEM3Q9BZQ6 932 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 IQCGQ9H095 443 aaKnown RBP16.84■□□□□ 0.29
SYNE3-203ENST00000554873 DPH5Q9H2P9 285 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 NLRC4Q9NPP4 1024 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 NMRK1Q9NWW6 199 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
SYNE3-203ENST00000554873 NOC2LQ9Y3T9 749 aaKnown RBP16.84■□□□□ 0.29
SYNE3-203ENST00000554873 TTI1O43156 1089 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 SLC37A4O43826 429 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYNE3-203ENST00000554873 TAOK1Q7L7X3 1001 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 WDR66Q8TBY9 1149 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 DDX12PQ92771 950 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 TMEM237Q96Q45 408 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 STOML1Q9UBI4 398 aa16.84■□□□□ 0.29
SYNE3-203ENST00000554873 POTEMA6NI47 508 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 SIGLEC16A6NMB1 481 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 TLR2O60603 784 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 AFPP02771 609 aaKnown RBP16.83■□□□□ 0.29
SYNE3-203ENST00000554873 TM4SF1P30408 202 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 VHLP40337 213 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 PMS2P54278 862 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 MCL1Q07820 350 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 RAD54LQ92698 747 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 RMDN2Q96LZ7 410 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 KLHL14Q9P2G3 628 aa16.83■□□□□ 0.29
SYNE3-203ENST00000554873 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 CETN3O15182 167 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 TJP3O95049 919 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 TDP2O95551 362 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 SH3BGRP55822 239 aaPredicted RBP16.83■□□□□ 0.28
SYNE3-203ENST00000554873 DEUP1Q05D60 604 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 Q4G0T1 1027 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 CCNJLQ8IV13 435 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 NEDD1Q8NHV4 660 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 RPL26L1Q9UNX3 145 aaKnown RBP16.83■□□□□ 0.28
SYNE3-203ENST00000554873 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 MAST2Q6P0Q8 1798 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 NOL4O94818 638 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 ORC2Q13416 577 aaPredicted RBP16.83■□□□□ 0.28
SYNE3-203ENST00000554873 RASIP1Q5U651 963 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 MKL1Q969V6 931 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 CARD9Q9H257 536 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 DCLRE1BQ9H816 532 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 RMI1Q9H9A7 625 aa16.83■□□□□ 0.28
SYNE3-203ENST00000554873 H0Y3Z8 333 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 ATP9AO75110 1047 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 SERPING1P05155 500 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 RNASELQ05823 741 aaKnown RBP16.82■□□□□ 0.28
SYNE3-203ENST00000554873 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
SYNE3-203ENST00000554873 USP17L5A8MUK1 530 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 GSTO1P78417 241 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 OCRLQ01968 901 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 TNFAIP8L3Q5GJ75 292 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 FAM83BQ5T0W9 1011 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 INPP5DQ92835 1189 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 GATA6Q92908 595 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 RNF25Q96BH1 459 aaPredicted RBP16.82■□□□□ 0.28
SYNE3-203ENST00000554873 COA7Q96BR5 231 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 CEP95Q96GE4 821 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 TSG101Q99816 390 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 TMEM109Q9BVC6 243 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 PHACTR1Q9C0D0 580 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 MAF1Q9H063 256 aa16.82■□□□□ 0.28
SYNE3-203ENST00000554873 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
SYNE3-203ENST00000554873 TMCC1O94876 653 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 CCDC166P0CW27 439 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 PABPC4Q13310 644 aaKnown RBP eCLIP16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ECM1Q16610 540 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 ANKLE1Q8NAG6 615 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
SYNE3-203ENST00000554873 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
SYNE3-203ENST00000554873 SPATA16Q9BXB7 569 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms