RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ORC2Q13416 577 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SNAPC2Q13487 334 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 CCL14Q16627 93 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ZCWPW2Q504Y3 356 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 TAPT1Q6NXT6 567 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 CNNM4Q6P4Q7 775 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 C17orf99Q6UX52 265 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ARMC9Q7Z3E5 817 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 CCDC60Q8IWA6 550 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 AOPEPQ8N6M6 819 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ANKRD13CQ8N6S4 541 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ZSWIM2Q8NEG5 633 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 TRPV1Q8NER1 839 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 PPP1R13LQ8WUF5 828 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 BSNDQ8WZ55 320 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 NAP1L5Q96NT1 182 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 RMDN3Q96TC7 470 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 C7orf25Q9BPX7 421 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SEMA6BQ9H3T3 888 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ACAD9Q9H845 621 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 XPNPEP1Q9NQW7 623 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 PDLIM7Q9NR12 457 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SAMSN1Q9NSI8 373 aaKnown RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 TMOD4Q9NZQ9 345 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 USP25Q9UHP3 1055 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 NRBP1Q9UHY1 535 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 CPA4Q9UI42 421 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 GJD2Q9UKL4 321 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 RABGAP1Q9Y3P9 1069 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 AK5Q9Y6K8 562 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ADGRA3Q8IWK6 1321 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 IGKV6D-21A0A0A0MT36 114 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 GOLGA6L3A6NEY3 463 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 C1QTNF9BB2RNN3 333 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 TISP43B9A030 160 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 IPO5O00410 1097 aaKnown RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 LAD1O00515 517 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 BACH1O14867 736 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 TBX3O15119 743 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 MARCH6O60337 910 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 BMP15O95972 392 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 F11P03951 625 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 MYCLP12524 364 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 UBA1P22314 1058 aaKnown RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 ICAM3P32942 547 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 FKBP1BP68106 108 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 PABPC4Q13310 644 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 GIT2Q14161 759 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 PDIA5Q14554 519 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 PLS1Q14651 629 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 LRRC41Q15345 812 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 CDKAL1Q5VV42 579 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 PLA2G4FQ68DD2 849 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 NCAPH2Q6IBW4 605 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 CYP4F22Q6NT55 531 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 TTI2Q6NXR4 508 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 C1orf186Q6ZWK4 172 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 EPM2AIP1Q7L775 607 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 NIPA1Q7RTP0 329 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 FBXO16Q8IX29 292 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 TMEM130Q8N3G9 435 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 CNNM3Q8NE01 707 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 SNX29Q8TEQ0 813 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 PIGOQ8TEQ8 1089 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 VTI1AQ96AJ9 217 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 MYO19Q96H55 970 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 FAM84AQ96KN4 292 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATXN3-230ENST00000554673 LRWD1Q9UFC0 647 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 MAPK8IP1Q9UQF2 711 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 SLC45A1Q9Y2W3 748 aa6.53□□□□□ -1.36
ATXN3-230ENST00000554673 IGSF9BQ9UPX0 1349 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 CHMP2AO43633 222 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 FARP2O94887 1054 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-230ENST00000554673 RHOBTB3O94955 611 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 RPN1P04843 607 aaKnown RBP6.52□□□□□ -1.37
ATXN3-230ENST00000554673 PLA2G4BP0C869 781 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 ZBTB48P10074 688 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-230ENST00000554673 RPA1P27694 616 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 CCT6AP40227 531 aaKnown RBP6.52□□□□□ -1.37
ATXN3-230ENST00000554673 PBX1P40424 430 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 GJA8P48165 433 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 ZNF165P49910 485 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 ZNF75DP51815 510 aa6.52□□□□□ -1.37
ATXN3-230ENST00000554673 GDF10P55107 478 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms