RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SOX5P35711 763 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 FOXD4Q12950 439 aaPredicted RBP14.87□□□□□ -0.03
VTI1B-204ENST00000554659 CDO1Q16878 200 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 ENOSF1Q7L5Y1 443 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 CEP95Q96GE4 821 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 LRRC1Q9BTT6 524 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 CCSER1Q9C0I3 900 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 IP6K2Q9UHH9 426 aa14.87□□□□□ -0.03
VTI1B-204ENST00000554659 CHGBP05060 677 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 PDHA1P08559 390 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 PYGBP11216 843 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 FOXO4P98177 505 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
VTI1B-204ENST00000554659 LRIG3Q6UXM1 1119 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 C11orf70Q9BRQ4 267 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 MRPL40Q9NQ50 206 aaKnown RBP14.86□□□□□ -0.03
VTI1B-204ENST00000554659 CPSF3Q9UKF6 684 aaKnown RBP14.86□□□□□ -0.03
VTI1B-204ENST00000554659 FOXP2O15409 715 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF18P17022 549 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 OCA2Q04671 838 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 SUPT20HL1Q3ZLR7 823 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 DPP9Q86TI2 863 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 RHOT1Q8IXI2 618 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ETNK1Q9HBU6 452 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
VTI1B-204ENST00000554659 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 GH2P01242 217 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 SRGNP10124 158 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 FCER1AP12319 257 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ARFIP2P53365 341 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 C1orf146Q5VVC0 180 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 C16orf87Q6PH81 154 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 TMEM270Q6UE05 265 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 CPVLQ9H3G5 476 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 KLC4Q9NSK0 619 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 SSU72P8A0A1W2PR75 194 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 SRGAP2CP0DJJ0 459 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 PAMP19021 973 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 KRT76Q01546 638 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 DPYDQ12882 1025 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 NR1I3Q14994 352 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 TRIM72Q6ZMU5 477 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ACAD11Q709F0 780 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 EPN3Q9H201 632 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 ARHGEF40Q8TER5 1519 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
VTI1B-204ENST00000554659 CROCC2H7BZ55 1655 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 MEFVO15553 781 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 NPR1P16066 1061 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 MDH1P40925 334 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 BAG6P46379 1132 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 USP11P51784 963 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 POTEGQ6S5H5 508 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 ADSSL1Q8N142 457 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 DDX56Q9NY93 547 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 MAN1A2O60476 641 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 KRT7P08729 469 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 MCF2P10911 925 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 FMR1Q06787 632 aaKnown RBP eCLIP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 BYSLQ13895 437 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 PDIA5Q14554 519 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 ATP11CQ8NB49 1132 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 GIPC2Q8TF65 315 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 TRIM33Q9UPN9 1127 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 CLDN3O15551 220 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 KRT14P02533 472 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 ASNSP08243 561 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 HSPA9P38646 679 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 GLYCTKQ8IVS8 523 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 AP2B1P63010 937 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 ACTN3Q08043 901 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 PPP6R3Q5H9R7 873 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 RYBPQ8N488 228 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 CDC26Q8NHZ8 85 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 KCNV2Q8TDN2 545 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 RNF25Q96BH1 459 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 FAM167AQ96KS9 214 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 RNPC3Q96LT9 517 aaKnown RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
VTI1B-204ENST00000554659 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.85□□□□□ -0.03
VTI1B-204ENST00000554659 PDXKO00764 312 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 AGTP01019 485 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 P4HBP07237 508 aaKnown RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 NOP9Q86U38 636 aaKnown RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 RNF217Q8TC41 542 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 FAM167BQ9BTA0 163 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 PHF20Q9BVI0 1012 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SENP1Q9P0U3 644 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms