RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ENGASEQ8NFI3 743 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 CCDC43Q96MW1 224 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 EIF2AK1Q9BQI3 630 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 INO80BQ9C086 356 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 WRAP73Q9P2S5 460 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 PLXNA4Q9HCM2 1894 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 A0A087WZ62 844 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 WNT7AO00755 349 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 FGFR4P22455 802 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 SFPQP23246 707 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 RFC5P40937 340 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 DSC3Q14574 896 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 FAM102BQ5T8I3 360 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 RNF169Q8NCN4 708 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 FDXACB1Q9BRP7 624 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 LMAN2LQ9H0V9 348 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 ELAC1Q9H777 363 aaKnown RBP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
SHMT2-214ENST00000554604 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 SPTBN5Q9NRC6 3674 aaKnown RBP13.81□□□□□ -0.2
SHMT2-214ENST00000554604 GRM6O15303 877 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 HOXA2O43364 376 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 GAS2O43903 313 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 SLITRK3O94933 977 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 CSPG5O95196 566 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 LINC00271P0C7V0 271 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 FGFR1P11362 822 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 KCNQ1P51787 676 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 FAM189BP81408 668 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 EMC2Q15006 297 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 EP400NLQ6ZTU2 488 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 CATSPER4Q7RTX7 472 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 NOSTRINQ8IVI9 506 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 P2RX5Q93086 422 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 TMEM143Q96AN5 459 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 MTMR9Q96QG7 549 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 GOLPH3LQ9H4A5 285 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 DHX33Q9H6R0 707 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 ALG13Q9NP73 1137 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
SHMT2-214ENST00000554604 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
SHMT2-214ENST00000554604 POTEMA6NI47 508 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 ZBTB39O15060 712 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 CAVIN2O95810 425 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TYRO3Q06418 890 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 PTPAQ15257 358 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 ZNF174Q15697 407 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 RILPL1Q5EBL4 403 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 FMR1NBQ8N0W7 255 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 KLHL23Q8NBE8 558 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 PRPF31Q8WWY3 499 aaKnown RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 UHRF1Q96T88 793 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 MTRQ99707 1265 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 HSD17B14Q9BPX1 270 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 TMEM60Q9H2L4 133 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 UBE2ZQ9H832 354 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 PLAGL2Q9UPG8 496 aa13.79□□□□□ -0.2
SHMT2-214ENST00000554604 PIN4Q9Y237 131 aaKnown RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 MORC2Q9Y6X9 1032 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-214ENST00000554604 A0A087WWV3 80 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 A0A0U1RQF3 1178 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 ASAP2O43150 1006 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 LYPLA2O95372 231 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 ITGB1P05556 798 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 BMP1P13497 986 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 KCNA5P22460 613 aa13.78□□□□□ -0.2
SHMT2-214ENST00000554604 CMA1P23946 247 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms