RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CFPP27918 469 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 TOP3AQ13472 1001 aaPredicted RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 RRP12Q5JTH9 1297 aaKnown RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 NXNQ6DKJ4 435 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 GPR155Q7Z3F1 870 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 THEMISQ8N1K5 641 aaPredicted RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 OR2I1PQ8NGU4 316 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 COA7Q96BR5 231 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 CLIP3Q96DZ5 547 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 WRNIP1Q96S55 665 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 KIAA1683Q9H0B3 1180 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 L2HGDHQ9H9P8 463 aa6.73□□□□□ -1.33
CHD8-207ENST00000554384 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 PNMA8BQ9ULN7 279 aaPredicted RBP6.73□□□□□ -1.33
CHD8-207ENST00000554384 VSTM5A8MXK1 200 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 AP1G1O43747 822 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 SEC24DO94855 1032 aaPredicted RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 LY86O95711 162 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 ZNF888P0CJ79 500 aaPredicted RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 POLD1P28340 1107 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 RRADP55042 308 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 PPP3CAQ08209 521 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 ADAM15Q13444 863 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 EIF4HQ15056 248 aaKnown RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 IFIT1BQ5T764 474 aaKnown RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 C1QL4Q86Z23 238 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 GLB1L3Q8NCI6 653 aaPredicted RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 PIK3C3Q8NEB9 887 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 RSAD2Q8WXG1 361 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 NKD2Q969F2 451 aaPredicted RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 YTHDC1Q96MU7 727 aaKnown RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 GTPBP4Q9BZE4 634 aaKnown RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 CD320Q9NPF0 282 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 DDX20Q9UHI6 824 aaKnown RBP6.72□□□□□ -1.33
CHD8-207ENST00000554384 INTUQ9ULD6 942 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 SYNPO2Q9UMS6 1093 aa6.72□□□□□ -1.33
CHD8-207ENST00000554384 CCDC154A6NI56 674 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 TMEM127O75204 238 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
CHD8-207ENST00000554384 CYP7B1O75881 506 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 HMGCRP04035 888 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 CHGBP05060 677 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
CHD8-207ENST00000554384 CYP2C19P33261 490 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 RAP1GAPP47736 663 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
CHD8-207ENST00000554384 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
CHD8-207ENST00000554384 MALLQ13021 153 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 IL10RAQ13651 578 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 CCDC181Q5TID7 509 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 TRIM68Q6AZZ1 485 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 Q6ZUG5 572 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 MIER2Q8N344 545 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
CHD8-207ENST00000554384 FATE1Q969F0 183 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 SLC12A5Q9H2X9 1139 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 SCOCQ9UIL1 159 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 ZDHHC9Q9Y397 364 aa6.71□□□□□ -1.34
CHD8-207ENST00000554384 A0A1W2PR48 441 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 HTRA2O43464 458 aaPredicted RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 POU2F2P09086 479 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 GAAP10253 952 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 ADSLP30566 484 aaPredicted RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 MCAMP43121 646 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 GPR15P49685 360 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 TBX4P57082 545 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 LINC00310P59036 64 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 PCOLCEQ15113 449 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 NOMO1Q15155 1222 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 UBE3CQ15386 1083 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 MUM1L1Q5H9M0 696 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 CXorf57Q6NSI4 855 aaKnown RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 LMBR1LQ6UX01 489 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 MSL3Q8N5Y2 521 aaKnown RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 TXNDC5Q8NBS9 432 aaKnown RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 PPP1R14CQ8TAE6 165 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 RIN2Q8WYP3 895 aaPredicted RBP6.7□□□□□ -1.34
CHD8-207ENST00000554384 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 TIFAQ96CG3 184 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 CSRNP2Q9H175 543 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 SLC52A1Q9NWF4 448 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 NTMQ9P121 344 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 IPPQ9Y573 584 aa6.7□□□□□ -1.34
CHD8-207ENST00000554384 MAFGO15525 162 aa6.69□□□□□ -1.34
CHD8-207ENST00000554384 CYP1A1P04798 512 aaPredicted RBP6.69□□□□□ -1.34
CHD8-207ENST00000554384 PDCP20941 246 aa6.69□□□□□ -1.34
CHD8-207ENST00000554384 ETV4P43268 484 aa6.69□□□□□ -1.34
CHD8-207ENST00000554384 MRE11P49959 708 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms