RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NECAB2Q7Z6G3 386 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ERCC4Q92889 916 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 SLC5A5Q92911 643 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 MTMR8Q96EF0 704 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 DDX11Q96FC9 970 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 CEP89Q96ST8 783 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 KCNK12Q9HB15 430 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 DCP1AQ9NPI6 582 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 DTLQ9NZJ0 730 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ACEP12821 1306 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ZNF521Q96K83 1311 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 FANCIQ9NVI1 1328 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 TNS1Q9HBL0 1735 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 ACOT7O00154 380 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 FOXP2O15409 715 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 PAX4O43316 350 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 ULK1O75385 1050 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 FAHP16930 419 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 NCKAP1LP55160 1127 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 BROXQ5VW32 411 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 ETV3LQ6ZN32 361 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 FAM126BQ8IXS8 530 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 RAVER1Q8IY67 606 aaKnown RBP6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 TTLL11Q8NHH1 800 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 SCYL1Q96KG9 808 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 FMNL2Q96PY5 1086 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 EPB41L4BQ9H329 900 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 SIRT5Q9NXA8 310 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 RCAN3Q9UKA8 241 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 THRAP3Q9Y2W1 955 aaKnown RBP6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 SPATA31A1Q5TZJ5 1347 aa6.38□□□□□ -1.39
MTHFD1-206ENST00000554353 LRP5O75197 1615 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 POLR3AO14802 1390 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 PRKD3O94806 890 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 CYP17A1P05093 508 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 ASGR2P07307 311 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 MMEP08473 750 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 LSP1P33241 339 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 MLANAQ16655 118 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 CD300LDQ6UXZ3 194 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 FAM26EQ8N5C1 309 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 CNTD1Q8N815 330 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 EXOC6Q8TAG9 804 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 PUS7LQ9H0K6 701 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 MS4A5Q9H3V2 200 aa6.37□□□□□ -1.39
MTHFD1-206ENST00000554353 RGPD5Q99666 1765 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 NRKQ7Z2Y5 1582 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 CENPJQ9HC77 1338 aaPredicted RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 LRRC10BA6NIK2 292 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 RASSF10A6NK89 507 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 HRKO00198 91 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 LRG1P02750 347 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 MCCP23508 829 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 SESN3P58005 492 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 SMAD3P84022 425 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 EXOSC10Q01780 885 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 MTMR1Q13613 665 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 R3HDM1Q15032 1099 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 TERF2Q15554 542 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 SMAD2Q15796 467 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 EZH2Q15910 746 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 CATSPEREQ5SY80 951 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 MIB1Q86YT6 1006 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 NME8Q8N427 588 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 CLRN3Q8NCR9 226 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 HIPK4Q8NE63 616 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 GBP4Q96PP9 640 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 ANP32EQ9BTT0 268 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 TRIM8Q9BZR9 551 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 VTA1Q9NP79 307 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 ARHGAP28Q9P2N2 729 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 RBPJLQ9UBG7 517 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 NOC2LQ9Y3T9 749 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 SBF2Q86WG5 1849 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 CAMTA1Q9Y6Y1 1673 aa6.36□□□□□ -1.39
MTHFD1-206ENST00000554353 KAT6BQ8WYB5 2073 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 PPIP5K1Q6PFW1 1433 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 MYOCOSA0A1B0GUC4 107 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 TMEM253P0C7T8 217 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 NCAM1P13591 858 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 CD40P25942 277 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 SDHAP31040 664 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 MC3RP41968 323 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 NKX3-2P78367 333 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 DBPQ10586 325 aaPredicted RBP6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 CR1LQ2VPA4 569 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 ZFYVE27Q5T4F4 411 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms