RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ERLIN2O94905 339 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 BMP15O95972 392 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 ATF7P17544 494 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-211ENST00000554310 GLRA2P23416 452 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 PTENP60484 403 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 KRT79Q5XKE5 535 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 RNF169Q8NCN4 708 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 ASAP3Q8TDY4 903 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 MRPL9Q9BYD2 267 aaKnown RBP14.5□□□□□ -0.09
SHMT2-211ENST00000554310 MINDY3Q9H8M7 445 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 RNF19AQ9NV58 838 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 COG5Q9UP83 839 aa14.5□□□□□ -0.09
SHMT2-211ENST00000554310 PLXNA4Q9HCM2 1894 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 VPS37CA5D8V6 355 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-211ENST00000554310 LAG3P18627 525 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 CYP11B2P19099 503 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 MBTD1Q05BQ5 628 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 IL17AQ16552 155 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 CLLU1OSQ5K130 101 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 SPOUT1Q5T280 376 aaKnown RBP14.49□□□□□ -0.09
SHMT2-211ENST00000554310 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 CCDC51Q96ER9 411 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 NSUN3Q9H649 340 aaKnown RBP14.49□□□□□ -0.09
SHMT2-211ENST00000554310 FAM105AQ9NUU6 356 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 KIAA1024Q9UPX6 916 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 PCDHB12Q9Y5F1 795 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 REV3LO60673 3130 aa14.49□□□□□ -0.09
SHMT2-211ENST00000554310 A0A087WWV3 80 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 INO80B-WBP1J3KQ70 363 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 GRM6O15303 877 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 TSPAN1O60635 241 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 ZNF623O75123 536 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 AXLP30530 894 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 MRPS5P82675 430 aaKnown RBP14.48□□□□□ -0.09
SHMT2-211ENST00000554310 NCBP1Q09161 790 aaKnown RBP14.48□□□□□ -0.09
SHMT2-211ENST00000554310 ECM1Q16610 540 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 AAK1Q2M2I8 961 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 TJAP1Q5JTD0 557 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 KCTD17Q8N5Z5 321 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 CASD1Q96PB1 797 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
SHMT2-211ENST00000554310 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
SHMT2-211ENST00000554310 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 BDP1A6H8Y1 2624 aa14.48□□□□□ -0.09
SHMT2-211ENST00000554310 SPTBN5Q9NRC6 3674 aaKnown RBP14.48□□□□□ -0.09
SHMT2-211ENST00000554310 VWA3AA6NCI4 1184 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 ITGB1P05556 798 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-211ENST00000554310 PPM1AP35813 382 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 UBE3AQ05086 875 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 PPP2R5AQ15172 486 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 CDCA2Q69YH5 1023 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-211ENST00000554310 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 GLB1LQ6UWU2 654 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 KLHL23Q8NBE8 558 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 COLGALT1Q8NBJ5 622 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 HELQQ8TDG4 1101 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 HLA-CQ95604 372 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 PGBD4Q96DM1 585 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 ASB2Q96Q27 587 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 CWH43Q9H720 699 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 ALG13Q9NP73 1137 aaKnown RBP14.47□□□□□ -0.09
SHMT2-211ENST00000554310 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
SHMT2-211ENST00000554310 CNTNAP2Q9UHC6 1331 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 CARNS1A5YM72 827 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 LRRIQ4A6NIV6 560 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 DLL1O00548 723 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 SLC26A4O43511 780 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 EYA4O95677 639 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 SYT1P21579 422 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 NAMPTP43490 491 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 AMHR2Q16671 573 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 HYIQ5T013 277 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 UBXN11Q5T124 520 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 ZBTB8OSQ8IWT0 167 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 THNSL1Q8IYQ7 743 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 CNNM3Q8NE01 707 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 SPPL3Q8TCT6 385 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 SYMPKQ92797 1274 aaKnown RBP14.46□□□□□ -0.09
SHMT2-211ENST00000554310 KIFAP3Q92845 792 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 PRIMPOLQ96LW4 560 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 AK8Q96MA6 479 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 ZNF558Q96NG5 402 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 MMTAG2Q9BU76 263 aaKnown RBP14.46□□□□□ -0.09
SHMT2-211ENST00000554310 NT5C3AQ9H0P0 336 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 C2orf40Q9H1Z8 148 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 HCSTQ9UBK5 93 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 DNM3Q9UQ16 869 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 MYH15Q9Y2K3 1946 aa14.46□□□□□ -0.09
SHMT2-211ENST00000554310 FGF18O76093 207 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
SHMT2-211ENST00000554310 VCANP13611 3396 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 CDC25AP30304 524 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms