RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 GCNT3O95395 438 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 URODP06132 367 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CFHP08603 1231 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TGFB3P10600 412 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MYL4P12829 197 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 IL9P15248 144 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TNNI1P19237 187 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 SFPQP23246 707 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 YWHABP31946 246 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GBP1P32455 592 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 IRS1P35568 1242 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 LIG4P49917 911 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ASIC1P78348 528 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MRPS5P82675 430 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MRPS6P82932 125 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GRB10Q13322 594 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ITGB3BPQ13352 177 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 KARSQ15046 597 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MAPK6Q16659 721 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PFKFB3Q16875 520 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF568Q3ZCX4 644 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 EPC2Q52LR7 807 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ADALQ6DHV7 355 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TAF2Q6P1X5 1199 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 C16orf59Q7L2K0 433 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM192Q8IY95 271 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GJD3Q8N144 294 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NME8Q8N427 588 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PPTC7Q8NI37 304 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NEK9Q8TD19 979 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GPR152Q8TDT2 470 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CLIC6Q96NY7 704 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 SEPT5Q99719 369 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 COL25A1Q9BXS0 654 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 POLR3FQ9H1D9 316 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TRPC7Q9HCX4 862 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 JADE2Q9NQC1 790 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 KMT5AQ9NQR1 393 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TBC1D22BQ9NU19 505 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NXF1Q9UBU9 619 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ANAPC4Q9UJX5 808 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PCDHA4Q9UN74 947 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CEP131Q9UPN4 1083 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GNEQ9Y223 722 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PPME1Q9Y570 386 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CDK5RAP2Q96SN8 1893 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GSTTP1A0A1W2PQM5 241 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RRN3P2A6NIE6 340 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 K7ENM7 598 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 EML1O00423 815 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 B4GALT5O43286 388 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RFPL2O75678 378 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ARHGEF15O94989 841 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CCNE2O96020 404 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 OATP04181 439 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CASP1P29466 404 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PXNP49023 591 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ACOT2P49753 483 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CYP2J2P51589 502 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GUCY2FP51841 1108 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SMTNP53814 917 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 KCNA1Q09470 495 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 UGCGQ16739 394 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SLC35G1Q2M3R5 365 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF394Q53GI3 561 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CEP135Q66GS9 1140 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SCARA5Q6ZMJ2 495 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRR23BQ6ZRT6 265 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GPBP1Q86WP2 473 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 AFAP1L1Q8TED9 768 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 POMGNT1Q8WZA1 660 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 KAT2BQ92831 832 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MCRS1Q96EZ8 462 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TMX3Q96JJ7 454 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF558Q96NG5 402 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MTRQ99707 1265 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TARS2Q9BW92 718 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SPZ1Q9BXG8 430 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CRISPLD2Q9H0B8 497 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 BLZF1Q9H2G9 400 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 OSBPL3Q9H4L5 887 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RIOX1Q9H6W3 641 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZSWIM4Q9H7M6 989 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MRPL44Q9H9J2 332 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CYP4F11Q9HBI6 524 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RIC8AQ9NPQ8 531 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SNTG2Q9NY99 539 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MUTYHQ9UIF7 546 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PCDHB6Q9Y5E3 794 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 COL4A3BPQ9Y5P4 624 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TRPV2Q9Y5S1 764 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZMYM6O95789 1325 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MYH3P11055 1940 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PTPRQQ9UMZ3 2332 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DNAJC25-GNG10A0A024R161 153 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SYNJ2BP-COX16A0A087WUM0 186 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 IGKV6D-41A0A0C4DH26 115 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRR23AA6NEV1 266 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CLIC2O15247 247 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms