RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TPM3P06753 285 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 SRGAP2CP0DJJ0 459 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CYP2C9P11712 490 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CCL5P13501 91 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CLCN3P51790 818 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CASP5P51878 434 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 POU5F1BQ06416 359 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 NCAPHQ15003 741 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 EDRF1Q3B7T1 1238 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TMEM161BQ8NDZ6 487 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 LMBR1Q8WVP7 490 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 BICD1Q96G01 975 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 NLRP4Q96MN2 994 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CTAGE1Q96RT6 745 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 SEZ6LQ9BYH1 1024 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TBX20Q9UMR3 447 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 MBLAC1A4D2B0 266 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 M0QZ92 97 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 MYCP01106 439 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 ADAM9Q13443 819 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 CAPSQ13938 189 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 MAPK6Q16659 721 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 MARCH8Q5T0T0 291 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 ZNF410Q86VK4 478 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 FGFBP2Q9BYJ0 223 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 INO80BQ9C086 356 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 ARHGAP28Q9P2N2 729 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 GTF2IRD1Q9UHL9 959 aa11.48□□□□□ -0.57
TMEM55B-205ENST00000554028 DNM1LO00429 736 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 TREHO43280 583 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 PPP1R37O75864 691 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 TFRCP02786 760 aaKnown RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 CAPN2P17655 700 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 LIG4P49917 911 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 PMS1P54277 932 aaKnown RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 DRP2Q13474 957 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 MYBPC2Q14324 1141 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 NFIL3Q16649 462 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 SLFN12LQ6IEE8 588 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 FILIP1Q7Z7B0 1213 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 KSR1Q8IVT5 923 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 KIAA0319LQ8IZA0 1049 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 LINC01465Q8N7H1 131 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 KCNN1Q92952 543 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 DUSP9Q99956 384 aaKnown RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 NFKBIZQ9BYH8 718 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 STARD7Q9NQZ5 370 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 SAMSN1Q9NSI8 373 aaKnown RBP11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 FRMD4BQ9Y2L6 1034 aa11.47□□□□□ -0.57
TMEM55B-205ENST00000554028 A0A0U1RQG5 324 aaPredicted RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 KCNJ18B7U540 433 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 INO80B-WBP1J3KQ70 363 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 HNRNPDLO14979 420 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 KIAA0391O15091 583 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 VTNP04004 478 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 NR3C1P04150 777 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 NR2F2P24468 414 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MTIF2P46199 727 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 NLRP11P59045 1033 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 PTENP60484 403 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 ADAM17P78536 824 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 FANCCQ00597 558 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 KCNA1Q09470 495 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms