RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RIT2Q99578 217 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 UNC45AQ9H3U1 944 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 FAM86C1Q9NVL1 165 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 CDH22Q9UJ99 828 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 PIN4Q9Y237 131 aaKnown RBP9.92□□□□□ -0.82
TDP1-208ENST00000553989 NID2Q14112 1375 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 A0A087WZ62 844 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 GOLGA6L3A6NEY3 463 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 CPLX1O14810 134 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 TRAK2O60296 914 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 CLASP2O75122 1294 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 CXCL14O95715 111 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 WEE2P0C1S8 567 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 SKIP12755 728 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 RPS6KB1P23443 525 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 PSMA5P28066 241 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 AVPR2P30518 371 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 USP11P51784 963 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 CDC42EP1Q00587 391 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 ITIH3Q06033 890 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 TCF15Q12870 199 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 DRP2Q13474 957 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 KCNC3Q14003 757 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 RABEP1Q15276 862 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 RARS2Q5T160 578 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 GLB1LQ6UWU2 654 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 CATSPER4Q7RTX7 472 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 RHPN2Q8IUC4 686 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 MRPL43Q8N983 215 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 TDRD5Q8NAT2 981 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 KREMEN2Q8NCW0 462 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 TBCKQ8TEA7 893 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 SLC5A5Q92911 643 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 LPPQ93052 612 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 ASIC4Q96FT7 647 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 RIPOR3Q96MK2 946 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 NLRP4Q96MN2 994 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 FDXACB1Q9BRP7 624 aaPredicted RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 INO80BQ9C086 356 aaPredicted RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 GBP3Q9H0R5 595 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 ADAM7Q9H2U9 754 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 POMKQ9H5K3 350 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 NCOA5Q9HCD5 579 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
TDP1-208ENST00000553989 SNX14Q9Y5W7 946 aa9.91□□□□□ -0.82
TDP1-208ENST00000553989 CARNS1A5YM72 827 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 TMEM150BA6NC51 233 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 C2CD4DB7Z1M9 353 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 GOLGA6L22H0YM25 854 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 TDP2O95551 362 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 PDGFBP01127 241 aaPredicted RBP9.9□□□□□ -0.82
TDP1-208ENST00000553989 IFNAR1P17181 557 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 HSPA4P34932 840 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 DDIT3P35638 169 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 MTHFRP42898 656 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 PHKA2P46019 1235 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
TDP1-208ENST00000553989 GIT2Q14161 759 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 XKR3Q5GH77 459 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 ATAT1Q5SQI0 421 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
TDP1-208ENST00000553989 ZNF410Q86VK4 478 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 UBALD2Q8IYN6 164 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 C12orf76Q8N812 135 aaPredicted RBP9.9□□□□□ -0.82
TDP1-208ENST00000553989 RDM1Q8NG50 284 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 URGCPQ8TCY9 931 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 IRF2BPLQ9H1B7 796 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 MFSD1Q9H3U5 465 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 SH3GLB2Q9NR46 395 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 CHST12Q9NRB3 414 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
TDP1-208ENST00000553989 SORCS3Q9UPU3 1222 aa9.9□□□□□ -0.82
TDP1-208ENST00000553989 H0Y858 1186 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 ST18O60284 1047 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 GFRA3O60609 400 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 REC8O95072 547 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
TDP1-208ENST00000553989 HSP90AA1P07900 732 aaKnown RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 RAB27AP51159 221 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 NTRK3Q16288 839 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 Q4G0T1 1027 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 PLA2G4FQ68DD2 849 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 CLEC17AQ6ZS10 378 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 CABP7Q86V35 215 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 TMEM173Q86WV6 379 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 RSPH1Q8WYR4 309 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 FAM193BQ96PV7 902 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 JPH2Q9BR39 696 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 NIFKQ9BYG3 293 aaKnown RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 ZBP1Q9H171 429 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms