RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DNAI1Q9UI46 699 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 EPN1Q9Y6I3 576 aaPredicted RBP3.73□□□□□ -1.81
SRP54-204ENST00000553923 TCRBV16S1A1N1A0A5B0 115 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 HOXA3O43365 443 aaPredicted RBP3.72□□□□□ -1.81
SRP54-204ENST00000553923 KCNQ2O43526 872 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 CFBP00751 764 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 MTERF2Q49AM1 385 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 KRT40Q6A162 431 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 RD3Q7Z3Z2 195 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 ARHGEF19Q8IW93 802 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 C2orf69Q8N8R5 385 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 LINC00476Q8WZB0 136 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 E2F7Q96AV8 911 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 ARL8AQ96BM9 186 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 PDCD2LQ9BRP1 358 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 SOX7Q9BT81 388 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 SLC46A2Q9BY10 475 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 CPEB1Q9BZB8 566 aaKnown RBP3.72□□□□□ -1.81
SRP54-204ENST00000553923 C14orf93Q9H972 538 aaKnown RBP3.72□□□□□ -1.81
SRP54-204ENST00000553923 NDOR1Q9UHB4 597 aa3.72□□□□□ -1.81
SRP54-204ENST00000553923 SCAF4O95104 1147 aaKnown RBP3.71□□□□□ -1.82
SRP54-204ENST00000553923 TCF3P15923 654 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 GNAT2P19087 354 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 NPEPPSP55786 919 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 MYBPC3Q14896 1274 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 PRR16Q569H4 304 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 SLFN12LQ6IEE8 588 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 CCDC62Q6P9F0 684 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 KANSL1Q7Z3B3 1105 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 FGD2Q7Z6J4 655 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 IGSF22Q8N9C0 903 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 OR52N2Q8NGI0 321 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 MAGEB10Q96LZ2 347 aaPredicted RBP3.71□□□□□ -1.82
SRP54-204ENST00000553923 BOCQ9BWV1 1114 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 TRIM55Q9BYV6 548 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 OSBPL6Q9BZF3 934 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 WDR11Q9BZH6 1224 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 PITHD1Q9GZP4 211 aaPredicted RBP3.71□□□□□ -1.82
SRP54-204ENST00000553923 CYP4F11Q9HBI6 524 aa3.71□□□□□ -1.82
SRP54-204ENST00000553923 POLR2AP24928 1970 aaKnown RBP3.71□□□□□ -1.82
SRP54-204ENST00000553923 A0A0A6YYJ9 748 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 UBA6A0AVT1 1052 aaPredicted RBP3.7□□□□□ -1.82
SRP54-204ENST00000553923 DAPK3O43293 454 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 RECQL4O94761 1208 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 ERBB2P04626 1255 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 ITGB6P18564 788 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 FOXI1Q12951 378 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 VPS72Q15906 364 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 FAM214AQ32MH5 1076 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 FBXO42Q6P3S6 717 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 PPP1R14CQ8TAE6 165 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 NDC1Q9BTX1 674 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 LSM14BQ9BX40 385 aaKnown RBP3.7□□□□□ -1.82
SRP54-204ENST00000553923 ANKFY1Q9P2R3 1169 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 NCDNQ9UBB6 729 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.7□□□□□ -1.82
SRP54-204ENST00000553923 CHST2Q9Y4C5 530 aa3.7□□□□□ -1.82
SRP54-204ENST00000553923 COL3A1P02461 1466 aaPredicted RBP3.69□□□□□ -1.82
SRP54-204ENST00000553923 PTH2RP49190 550 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 KIF11P52732 1056 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 BCAR1P56945 870 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 ARHGAP44Q17R89 818 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 ZC3H12BQ5HYM0 836 aaKnown RBP3.69□□□□□ -1.82
SRP54-204ENST00000553923 TTC38Q5R3I4 469 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 IQSEC1Q6DN90 963 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 BHLHA9Q7RTU4 235 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 BRAPQ7Z569 592 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 SIMC1Q8NDZ2 872 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 COQ10AQ96MF6 247 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 CPPED1Q9BRF8 314 aaPredicted RBP3.69□□□□□ -1.82
SRP54-204ENST00000553923 TRIM39Q9HCM9 518 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 ACSS2Q9NR19 701 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 ING3Q9NXR8 418 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 SFMBT1Q9UHJ3 866 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 CCDC9Q9Y3X0 531 aaKnown RBP3.69□□□□□ -1.82
SRP54-204ENST00000553923 KDM2BQ8NHM5 1336 aa3.69□□□□□ -1.82
SRP54-204ENST00000553923 GAAP10253 952 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 CDK4P11802 303 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 GYPEP15421 78 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 APOBEC3AP31941 199 aaPredicted RBP3.68□□□□□ -1.82
SRP54-204ENST00000553923 SEC24CP53992 1094 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 USP14P54578 494 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 EPHA7Q15375 998 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 BEAN1Q3B7T3 259 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 PRAMEF9Q5VWM5 478 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 GPRIN1Q7Z2K8 1008 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 JMYQ8N9B5 988 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 PIK3C3Q8NEB9 887 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 SUPT20HQ8NEM7 779 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 ANKS1AQ92625 1134 aa3.68□□□□□ -1.82
SRP54-204ENST00000553923 SETD1BQ9UPS6 1966 aaKnown RBP3.68□□□□□ -1.82
SRP54-204ENST00000553923 LEFTY2O00292 366 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 DNAJC6O75061 913 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 KRT37O76014 449 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 NCR1O76036 304 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 CYP17A1P05093 508 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 PTX3P26022 381 aaPredicted RBP3.67□□□□□ -1.82
SRP54-204ENST00000553923 BMPR1AP36894 532 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 MRPL49Q13405 166 aaKnown RBP3.67□□□□□ -1.82
SRP54-204ENST00000553923 UNQ6494/PRO21346Q6UXR6 183 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms