RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ZNF668Q96K58 619 aaPredicted RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 SAMD11Q96NU1 681 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 YME1L1Q96TA2 773 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 PYM1Q9BRP8 204 aaKnown RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 RUSC1Q9BVN2 902 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 FZD8Q9H461 694 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 BLOC1S4Q9NUP1 217 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 AGPAT5Q9NUQ2 364 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 ODF2LQ9ULJ1 636 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 YBX2Q9Y2T7 364 aaKnown RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 RWDD3Q9Y3V2 267 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 LOXHD1Q8IVV2 1947 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 LRRIQ4A6NIV6 560 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 H0YCG3 227 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 INO80B-WBP1J3KQ70 363 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 MGEA5O60502 916 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 CSDE1O75534 798 aaKnown RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 UPP2O95045 317 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SSBP05455 408 aaKnown RBP eCLIP10.32□□□□□ -0.766e-9■□□□□ 8.8
CHD8-206ENST00000553870 CA3P07451 260 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 HOXA11P31270 313 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 ABCD1P33897 745 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 ME1P48163 572 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SMTNP53814 917 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 MBTD1Q05BQ5 628 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 MAPK6Q16659 721 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SPECC1Q5M775 1068 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 ADALQ6DHV7 355 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 USP49Q70CQ1 688 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SV2BQ7L1I2 683 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 ECHDC2Q86YB7 292 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 DEPTORQ8TB45 409 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 TGS1Q96RS0 853 aaKnown RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 PLIN2Q99541 437 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 TTYH1Q9H313 450 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 CUEDC2Q9H467 287 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 TMEM134Q9H6X4 195 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 PRMT7Q9NVM4 692 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 FAM13BQ9NYF5 915 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 LARSQ9P2J5 1176 aaKnown RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 PCDHA7Q9UN72 937 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 PIN4Q9Y237 131 aaKnown RBP10.32□□□□□ -0.76
CHD8-206ENST00000553870 SIP14410 1827 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
CHD8-206ENST00000553870 LAMA3Q16787 3333 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 A0A1B0GUA9 196 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 ACKR2O00590 384 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 HIP1RO75146 1068 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 PLS3P13797 630 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 MYOGP15173 224 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 FGFR4P22455 802 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 NPTX2P47972 431 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 ERVK-21P61565 698 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 AMPD3Q01432 767 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 TAP1Q03518 808 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 MAPK7Q13164 816 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 ARSHQ5FYA8 562 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 TWF2Q6IBS0 349 aaKnown RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 FOXD4L3Q6VB84 417 aaPredicted RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 MRPL10Q7Z7H8 261 aaKnown RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 GPBP1Q86WP2 473 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 CMTR2Q8IYT2 770 aaKnown RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 DAW1Q8N136 415 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 FIBCD1Q8N539 461 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 IQUBQ8NA54 791 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 LEO1Q8WVC0 666 aaPredicted RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 PGBD4Q96DM1 585 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 RC3H2Q9HBD1 1191 aaKnown RBP10.31□□□□□ -0.76
CHD8-206ENST00000553870 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 PLSCR2Q9NRY7 297 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 FAM105AQ9NUU6 356 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 MTMR10Q9NXD2 777 aa10.31□□□□□ -0.76
CHD8-206ENST00000553870 LINC01553A4QN01 128 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 K7ERI5 159 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 TSPAN1O60635 241 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 KRT18P05783 430 aaKnown RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 RB1P06400 928 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 ARF4P18085 180 aaPredicted RBP10.3□□□□□ -0.76
CHD8-206ENST00000553870 CMA1P23946 247 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 STAT6P42226 847 aa10.3□□□□□ -0.76
CHD8-206ENST00000553870 ZNF131P52739 623 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms