RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 POLR3CQ9BUI4 534 aaPredicted RBP22.49■■□□□ 1.19
PRAF2-202ENST00000553851 AGPAT5Q9NUQ2 364 aa22.49■■□□□ 1.19
PRAF2-202ENST00000553851 FAM105AQ9NUU6 356 aa22.49■■□□□ 1.19
PRAF2-202ENST00000553851 ATG2AQ2TAZ0 1938 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 GTF2F1P35269 517 aaKnown RBP eCLIP22.48■■□□□ 1.19
PRAF2-202ENST00000553851 MCM2P49736 904 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 TOB1P50616 345 aaPredicted RBP22.48■■□□□ 1.19
PRAF2-202ENST00000553851 KCNT2Q6UVM3 1135 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 ERMNQ8TAM6 284 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 MICAL1Q8TDZ2 1067 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 LPPQ93052 612 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 PPP2R3CQ969Q6 453 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 NACC1Q96RE7 527 aa22.48■■□□□ 1.19
PRAF2-202ENST00000553851 USO1O60763 962 aaKnown RBP22.47■■□□□ 1.19
PRAF2-202ENST00000553851 ZNF623O75123 536 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 RPA1P27694 616 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 HOXA11P31270 313 aaPredicted RBP22.47■■□□□ 1.19
PRAF2-202ENST00000553851 ARL2P36404 184 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 RAB27AP51159 221 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 PTENP60484 403 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 TFDP1Q14186 410 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 CTC1Q2NKJ3 1217 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 MCTP1Q6DN14 999 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 PTCRAQ6ISU1 281 aaPredicted RBP22.47■■□□□ 1.19
PRAF2-202ENST00000553851 ASAP3Q8TDY4 903 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 ZNF558Q96NG5 402 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 PCDHB6Q9Y5E3 794 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 PCDHGC5Q9Y5F6 944 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 ARID2Q68CP9 1835 aa22.47■■□□□ 1.19
PRAF2-202ENST00000553851 GJB2P29033 226 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 LTBRP36941 435 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 PBX3P40426 434 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 FXR2P51116 673 aaKnown RBP eCLIP22.46■■□□□ 1.19
PRAF2-202ENST00000553851 POU5F1BQ06416 359 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 PTGDRQ13258 359 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 POTEGQ6S5H5 508 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 MAEAQ7L5Y9 396 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 ADGRD2Q7Z7M1 963 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 MRPL9Q9BYD2 267 aaKnown RBP22.46■■□□□ 1.19
PRAF2-202ENST00000553851 POLR3FQ9H1D9 316 aaPredicted RBP22.46■■□□□ 1.19
PRAF2-202ENST00000553851 TLR9Q9NR96 1032 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 DBR1Q9UK59 544 aaKnown RBP22.46■■□□□ 1.19
PRAF2-202ENST00000553851 PCDHB2Q9Y5E7 798 aa22.46■■□□□ 1.19
PRAF2-202ENST00000553851 BDP1A6H8Y1 2624 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 PLXNA4Q9HCM2 1894 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 MEIS3P2A8K0S8 358 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 LINC01565O15544 149 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 ERLIN2O94905 339 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 GLRA2P23416 452 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 ERVFC1P60507 584 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 PLCB3Q01970 1234 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 CAPSQ13938 189 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 PUS10Q3MIT2 529 aaKnown RBP22.45■■□□□ 1.18
PRAF2-202ENST00000553851 GLB1LQ6UWU2 654 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 RBM23Q86U06 439 aaKnown RBP22.45■■□□□ 1.18
PRAF2-202ENST00000553851 MRPS27Q92552 414 aaKnown RBP22.45■■□□□ 1.18
PRAF2-202ENST00000553851 PGBD4Q96DM1 585 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 PUF60Q9UHX1 559 aaKnown RBP22.45■■□□□ 1.18
PRAF2-202ENST00000553851 LZTS1Q9Y250 596 aa22.45■■□□□ 1.18
PRAF2-202ENST00000553851 GRXCR2A6NFK2 248 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 INO80B-WBP1J3KQ70 363 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 OFD1O75665 1012 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 PPM1AP35813 382 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 NRIP1P48552 1158 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 DLX2Q07687 328 aaPredicted RBP22.44■■□□□ 1.18
PRAF2-202ENST00000553851 ADAM15Q13444 863 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 PCBP1Q15365 356 aaKnown RBP eCLIP22.44■■□□□ 1.18
PRAF2-202ENST00000553851 UBXN11Q5T124 520 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 IFNLR1Q8IU57 520 aaPredicted RBP22.44■■□□□ 1.18
PRAF2-202ENST00000553851 GPRC5CQ9NQ84 441 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 SPG21Q9NZD8 308 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 LRWD1Q9UFC0 647 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 SMC3Q9UQE7 1217 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 INPP5FQ9Y2H2 1132 aa22.44■■□□□ 1.18
PRAF2-202ENST00000553851 H3BQV1 296 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 IL9P15248 144 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 CCT6AP40227 531 aaKnown RBP22.43■■□□□ 1.18
PRAF2-202ENST00000553851 BCAR1P56945 870 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 KRT17Q04695 432 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 NCBP1Q09161 790 aaKnown RBP22.43■■□□□ 1.18
PRAF2-202ENST00000553851 PDIA5Q14554 519 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 NOMO2Q5JPE7 1267 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 HAUS3Q68CZ6 603 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 PDE12Q6L8Q7 609 aaKnown RBP22.43■■□□□ 1.18
PRAF2-202ENST00000553851 MRPL10Q7Z7H8 261 aaKnown RBP22.43■■□□□ 1.18
PRAF2-202ENST00000553851 MCPH1Q8NEM0 835 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 RSPH1Q8WYR4 309 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 TLE6Q9H808 572 aa22.43■■□□□ 1.18
PRAF2-202ENST00000553851 ARHGEF35A5YM69 484 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 NT5C1B-RDH14C9J2C7 533 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 FSCN2O14926 492 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 TSPAN1O60635 241 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 MUTP22033 750 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 AXLP30530 894 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
PRAF2-202ENST00000553851 MBTD1Q05BQ5 628 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 CLUL1Q15846 466 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 ECM1Q16610 540 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 AGMOQ6ZNB7 445 aa22.42■■□□□ 1.18
PRAF2-202ENST00000553851 SLC39A11Q8N1S5 342 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms