RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PON1P27169 355 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-207ENST00000553837 SLC18A3Q16572 532 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 QPCTQ16769 361 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 CPLX4Q7Z7G2 160 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 LRRC45Q96CN5 670 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 FIZ1Q96SL8 496 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 SIX2Q9NPC8 291 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 SYNPO2Q9UMS6 1093 aa13.27□□□□□ -0.29
SHMT2-207ENST00000553837 ZSCAN5CA6NGD5 496 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-207ENST00000553837 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
SHMT2-207ENST00000553837 POLR2MP0CAP2 368 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 PPP2R2AP63151 447 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 PTK2Q05397 1052 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 KLHL30Q0D2K2 578 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 COG2Q14746 738 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 EPHA7Q15375 998 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 SPRED3Q2MJR0 410 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 AGBL2Q5U5Z8 902 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 ZNF571Q7Z3V5 609 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-207ENST00000553837 SUPT20HQ8NEM7 779 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 CCHCR1Q8TD31 782 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 SLC35C1Q96A29 364 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 KRT12Q99456 494 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-207ENST00000553837 EBF2Q9HAK2 575 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
SHMT2-207ENST00000553837 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
SHMT2-207ENST00000553837 CALUO43852 315 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 BUB1BO60566 1050 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 PALMO75781 387 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 UCHL3P15374 230 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 HSD17B3P37058 310 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 TNNC1P63316 161 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 MTA1Q13330 715 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 RIPK1Q13546 671 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 NAB2Q15742 525 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 ASIC2Q16515 512 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 TCP11Q8WWU5 503 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 RAPGEF5Q92565 580 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 UNC45AQ9H3U1 944 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 GOPCQ9HD26 462 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 BAIAP2L1Q9UHR4 511 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 FTCDO95954 541 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 GCKP35557 465 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 EPS15P42566 896 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 CUL1Q13616 776 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 OLFML3Q9NRN5 406 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-207ENST00000553837 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
SHMT2-207ENST00000553837 H0YGN5 161 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 ATP2C2O75185 946 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
SHMT2-207ENST00000553837 KCNA3P22001 575 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 TMOD1P28289 359 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
SHMT2-207ENST00000553837 RPS6KA3P51812 740 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 PRELPP51888 382 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 DGKZQ13574 1117 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 PPP1R7Q15435 360 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 CEP55Q53EZ4 464 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 HIBCHQ6NVY1 386 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-207ENST00000553837 B3GNT9Q6UX72 402 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 LDHDQ86WU2 507 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 MYCT1Q8N699 235 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 KLHL23Q8NBE8 558 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 AGBL1Q96MI9 1066 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 IRAK4Q9NWZ3 460 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 NFS1Q9Y697 457 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 STK24Q9Y6E0 443 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 CCT8L1PA6NM43 557 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 GSTA1P08263 222 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 PECAM1P16284 738 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-207ENST00000553837 DNA2P51530 1060 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHMT2-207ENST00000553837 KIAA0753Q2KHM9 967 aa13.24□□□□□ -0.29
SHMT2-207ENST00000553837 ACCSLQ4AC99 568 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms