RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HPSEQ9Y251 543 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 MYMKA6NI61 221 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 H0YCG3 227 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 SLFN14P0C7P3 912 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 IDEP14735 1019 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 LIG1P18858 919 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 NPTX2P47972 431 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 WDR5P61964 334 aaKnown RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 MAPK7Q13164 816 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 GIT2Q14161 759 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 MAPK6Q16659 721 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 TMEM132AQ24JP5 1023 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 MYCT1Q8N699 235 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 KIFC3Q9BVG8 833 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 C1orf112Q9NSG2 853 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 PIN4Q9Y237 131 aaKnown RBP15.28■□□□□ 0.04
TUBB3-202ENST00000553656 TET1Q8NFU7 2136 aa15.28■□□□□ 0.04
TUBB3-202ENST00000553656 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 ATP2A2P16615 1042 aaKnown RBP15.27■□□□□ 0.04
TUBB3-202ENST00000553656 GAP43P17677 238 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 IBSPP21815 317 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-202ENST00000553656 ASIC1P78348 528 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 TCTN1Q2MV58 587 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 RASIP1Q5U651 963 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 TWF2Q6IBS0 349 aaKnown RBP15.27■□□□□ 0.04
TUBB3-202ENST00000553656 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 CCDC65Q8IXS2 484 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 TMEM87AQ8NBN3 555 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 CNNM3Q8NE01 707 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 PHOSPHO2Q8TCD6 241 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 SPIRE2Q8WWL2 714 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 STAMQ92783 540 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 ADAM2Q99965 735 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-202ENST00000553656 TMX1Q9H3N1 280 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 CHST12Q9NRB3 414 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
TUBB3-202ENST00000553656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-202ENST00000553656 K7ERI5 159 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 SLC16A4O15374 487 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 PRKCBP05771 671 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 SCP2P22307 547 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 AXLP30530 894 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 ABCD1P33897 745 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 AFMP43652 599 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 ZNF131P52739 623 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 STRN3Q13033 797 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
TUBB3-202ENST00000553656 SLC17A8Q8NDX2 589 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 SEL1LQ9UBV2 794 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 LRFN2Q9ULH4 789 aa15.26■□□□□ 0.03
TUBB3-202ENST00000553656 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-202ENST00000553656 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-202ENST00000553656 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 K7ENM7 598 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 ENPP3O14638 875 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 ACTN4O43707 911 aaKnown RBP15.25■□□□□ 0.03
TUBB3-202ENST00000553656 TRAK2O60296 914 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 TSPAN1O60635 241 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 ZNF202O95125 648 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 STAG3L1P0CL83 205 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 DEFB103AP81534 67 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 FAM160A1Q05DH4 1040 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 PRPF4BQ13523 1007 aaKnown RBP15.25■□□□□ 0.03
TUBB3-202ENST00000553656 LONRF3Q496Y0 759 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 KANK3Q6NY19 840 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 SLC24A5Q71RS6 500 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 CCDC51Q96ER9 411 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 NTPCRQ9BSD7 190 aaKnown RBP15.25■□□□□ 0.03
TUBB3-202ENST00000553656 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 TMEM134Q9H6X4 195 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 RGS18Q9NS28 235 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 PANK4Q9NVE7 773 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 ARHGAP28Q9P2N2 729 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 MICAL3Q7RTP6 2002 aa15.25■□□□□ 0.03
TUBB3-202ENST00000553656 ADGRA3Q8IWK6 1321 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 CNTNAP2Q9UHC6 1331 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 MYH11P35749 1972 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 ACKR2O00590 384 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 MGEA5O60502 916 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 UPP2O95045 317 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 MYL1P05976 194 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms