RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PFKPQ01813 784 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 MGAT2Q10469 447 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 LONRF1Q17RB8 773 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 TMEM95Q3KNT9 176 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 MUM1L1Q5H9M0 696 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 DARS2Q6PI48 645 aaKnown RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 KLHDC10Q6PID8 442 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 APBB1IPQ7Z5R6 666 aaPredicted RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 BMP8AQ7Z5Y6 402 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 AMIGO3Q86WK7 504 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 IFNL2Q8IZJ0 200 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 OR2I1PQ8NGU4 316 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 PPP1R14CQ8TAE6 165 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 IGDCC4Q8TDY8 1250 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 RIN2Q8WYP3 895 aaPredicted RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 PGBD4Q96DM1 585 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 SGCZQ96LD1 299 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 PTPN18Q99952 460 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 FDXACB1Q9BRP7 624 aaPredicted RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 BTBD2Q9BX70 525 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 RNF32Q9H0A6 362 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 OR10A5Q9H207 317 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 GREM2Q9H772 168 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 DMRT3Q9NQL9 472 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 KLHL14Q9P2G3 628 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 RBPJLQ9UBG7 517 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 FTSJ1Q9UET6 329 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 USP18Q9UMW8 372 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 CFAP20Q9Y6A4 193 aaKnown RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 A0A0A6YYK5 440 aaPredicted RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 CCDC189A1A4V9 331 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 CAPN8A6NHC0 703 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 NUDT19A8MXV4 375 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 PQBP1O60828 265 aaKnown RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 CUTAO60888 179 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 FGAP02671 866 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 MPOP05164 745 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 SETSIPP0DME0 302 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 SDHBP21912 280 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 FBLN1P23142 703 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 PAX3P23760 479 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 PEX2P28328 305 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 STAT5AP42229 794 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 TRAPPC10P48553 1259 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 NFATC3Q12968 1075 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 RNF220Q5VTB9 566 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 ETV3LQ6ZN32 361 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 MAEAQ7L5Y9 396 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 COL23A1Q86Y22 540 aaPredicted RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 DTX3Q8N9I9 347 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 NSUN6Q8TEA1 469 aaKnown RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 HOXB13Q92826 284 aaPredicted RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 HDAC10Q969S8 669 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 NOL10Q9BSC4 688 aaKnown RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 SOX7Q9BT81 388 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 BCAS3Q9H6U6 928 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 DBR1Q9UK59 544 aaKnown RBP4.83□□□□□ -1.64
TDP1-207ENST00000553617 SYNPO2Q9UMS6 1093 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 PLA2G2DQ9UNK4 145 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 STXBP5LQ9Y2K9 1186 aa4.83□□□□□ -1.64
TDP1-207ENST00000553617 A0A088AWK7 358 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 RASA4BC9J798 803 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 SLC16A6O15403 523 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 MAFGO15525 162 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 RASA4O43374 803 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 NRP2O60462 931 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 TMEM127O75204 238 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 MAP2K6P52564 334 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 YBX1P67809 324 aaKnown RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 IL13RA1P78552 427 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 IL10RAQ13651 578 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 SEPT2Q15019 361 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 RAB3GAP1Q15042 981 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 HSP90AB4PQ58FF6 505 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 VASNQ6EMK4 673 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 ZC3H14Q6PJT7 736 aaKnown RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 TMED8Q6PL24 325 aaPredicted RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 PLBD2Q8NHP8 589 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 KLHDC4Q8TBB5 520 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 CPA5Q8WXQ8 436 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 LRTOMTQ8WZ04 291 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 DPF2Q92785 391 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 KAT5Q92993 513 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 INTS4Q96HW7 963 aaKnown RBP4.82□□□□□ -1.64
TDP1-207ENST00000553617 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 ADI1Q9BV57 179 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 APOL5Q9BWW9 433 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 C22orf23Q9BZE7 217 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 UBA5Q9GZZ9 404 aa4.82□□□□□ -1.64
TDP1-207ENST00000553617 PPCSQ9HAB8 311 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms