RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RAB27AP51159 221 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 AMHR2Q16671 573 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 PPP4R3CPQ6ZMV5 832 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 ZNF598Q86UK7 904 aaKnown RBP20.43■□□□□ 0.86
CPSF2-202ENST00000553427 ZBTB8OSQ8IWT0 167 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 FIBCD1Q8N539 461 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 BSNDQ8WZ55 320 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 CLP1Q92989 425 aaKnown RBP20.43■□□□□ 0.86
CPSF2-202ENST00000553427 DRC1Q96MC2 740 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 PRDM12Q9H4Q4 367 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 C17orf75Q9HAS0 396 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 LRRIQ4A6NIV6 560 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 INO80B-WBP1J3KQ70 363 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 SPTLC2O15270 562 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 TSPAN1O60635 241 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 ZNF623O75123 536 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 ERLIN2O94905 339 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 LINC00271P0C7V0 271 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 PLCG1P19174 1290 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 HOXA11P31270 313 aaPredicted RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 TXLNAP40222 546 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 KARSQ15046 597 aaKnown RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 FAM187BQ17R55 369 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 FOXD4L5Q5VV16 416 aaPredicted RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 TWF2Q6IBS0 349 aaKnown RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 DAW1Q8N136 415 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 FOXD4L4Q8WXT5 416 aaPredicted RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 MYLIPQ8WY64 445 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 IFT74Q96LB3 600 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 PRIMPOLQ96LW4 560 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 GAS2L1Q99501 681 aaPredicted RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 BLOC1S4Q9NUP1 217 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
CPSF2-202ENST00000553427 RWDD3Q9Y3V2 267 aa20.42■□□□□ 0.86
CPSF2-202ENST00000553427 ATF7P17544 494 aaPredicted RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 POU3F3P20264 500 aaPredicted RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 NCBP1Q09161 790 aaKnown RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 MAPK7Q13164 816 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 BTG3Q14201 252 aaPredicted RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 USP49Q70CQ1 688 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 RASSF8Q8NHQ8 419 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 KCNG4Q8TDN1 519 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 LRRC15Q8TF66 581 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 ARNTL2Q8WYA1 636 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 RAD54LQ92698 747 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 EPSTI1Q96J88 318 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 CLIC6Q96NY7 704 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 PLIN2Q99541 437 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 TMEM117Q9H0C3 514 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 FZD8Q9H461 694 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 RNF19AQ9NV58 838 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 PRMT7Q9NVM4 692 aaPredicted RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
CPSF2-202ENST00000553427 STK17AQ9UEE5 414 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 CFAP45Q9UL16 551 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 ZDHHC9Q9Y397 364 aa20.41■□□□□ 0.86
CPSF2-202ENST00000553427 EPOPA6NHQ4 379 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 HIP1RO75146 1068 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 FOSL2P15408 326 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 EFNA5P52803 228 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 NOTUMQ6P988 496 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 PHLPP2Q6ZVD8 1323 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 DEPTORQ8TB45 409 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 CCDC113Q9H0I3 377 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 FAM105AQ9NUU6 356 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 CCDC39Q9UFE4 941 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 KCNG1Q9UIX4 513 aa20.4■□□□□ 0.86
CPSF2-202ENST00000553427 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.86
CPSF2-202ENST00000553427 CNTNAP2Q9UHC6 1331 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 C5orf67F2Z3F1 127 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 SSBP05455 408 aaKnown RBP eCLIP20.39■□□□□ 0.85
CPSF2-202ENST00000553427 RB1P06400 928 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 DMP1Q13316 513 aaPredicted RBP20.39■□□□□ 0.85
CPSF2-202ENST00000553427 ADGRE1Q14246 886 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 EPC2Q52LR7 807 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 UBXN11Q5T124 520 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 MRPL10Q7Z7H8 261 aaKnown RBP20.39■□□□□ 0.85
CPSF2-202ENST00000553427 TMEM192Q8IY95 271 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 LARP4BQ92615 738 aaKnown RBP20.39■□□□□ 0.85
CPSF2-202ENST00000553427 C17orf80Q9BSJ5 609 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 CERS4Q9HA82 394 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 ODF2LQ9ULJ1 636 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 MRPL42Q9Y6G3 142 aaKnown RBP20.39■□□□□ 0.85
CPSF2-202ENST00000553427 MYO9BQ13459 2157 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 COL6A3P12111 3177 aa20.39■□□□□ 0.85
CPSF2-202ENST00000553427 CUTAO60888 179 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 FGFR1P11362 822 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 ARF4P18085 180 aaPredicted RBP20.38■□□□□ 0.85
CPSF2-202ENST00000553427 DDIT3P35638 169 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 NPTX2P47972 431 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 GATMP50440 423 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 MAPK6Q16659 721 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 ARSHQ5FYA8 562 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 CCDC73Q6ZRK6 1079 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 CNNM3Q8NE01 707 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 FBXO22Q8NEZ5 403 aa20.38■□□□□ 0.85
CPSF2-202ENST00000553427 SPIRE2Q8WWL2 714 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms