RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CPLX2Q6PUV4 134 aaKnown RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 KRT25Q7Z3Z0 450 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 KSR1Q8IVT5 923 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 TMEM87AQ8NBN3 555 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 PGBD4Q96DM1 585 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 RIPOR3Q96MK2 946 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 TM6SF1Q9BZW5 370 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 ZBP1Q9H171 429 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 POMKQ9H5K3 350 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 CYP26B1Q9NR63 512 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 TSHZ2Q9NRE2 1034 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 FAM105AQ9NUU6 356 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 PIN4Q9Y237 131 aaKnown RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 WDFY4Q6ZS81 3184 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 MEIS3P2A8K0S8 358 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 C2CD4DB7Z1M9 353 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 SLC37A4O43826 429 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 DKC1O60832 514 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD8-203ENST00000553283 QARSP47897 775 aaKnown RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 NPEPPSP55786 919 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 PPP2R5CQ13362 524 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 INF2Q27J81 1249 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 LETM2Q2VYF4 491 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 PLA2G4FQ68DD2 849 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 MRPL10Q7Z7H8 261 aaKnown RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 C12orf76Q8N812 135 aaPredicted RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 KREMEN2Q8NCW0 462 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 SLC22A17Q8WUG5 538 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 PRPF31Q8WWY3 499 aaKnown RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 AUTS2Q8WXX7 1259 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 FAM20AQ96MK3 541 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 NLRP4Q96MN2 994 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
CHD8-203ENST00000553283 IFT122Q9HBG6 1241 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 VAV3Q9UKW4 847 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 SORCS3Q9UPU3 1222 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 INPP5FQ9Y2H2 1132 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 PCDHB2Q9Y5E7 798 aa10.51□□□□□ -0.73
CHD8-203ENST00000553283 CCDC194A0A1B0GVG4 234 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 PDGFBP01127 241 aaPredicted RBP10.5□□□□□ -0.73
CHD8-203ENST00000553283 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
CHD8-203ENST00000553283 WEE2P0C1S8 567 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 EPCAMP16422 314 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 SLC11A1P49279 550 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 NUBP1P53384 320 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 STK3Q13188 491 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
CHD8-203ENST00000553283 PPP4R3AQ6IN85 833 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 KIAA1841Q6NSI8 718 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 KANK3Q6NY19 840 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 SRGAP1Q7Z6B7 1085 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 PPFIBP1Q86W92 1011 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 ZNF280BQ86YH2 543 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 ZDHHC14Q8IZN3 488 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
CHD8-203ENST00000553283 SLC7A3Q8WY07 619 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 PHF20Q9BVI0 1012 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 VN1R3Q9BXE9 311 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 IRF2BPLQ9H1B7 796 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 DHX33Q9H6R0 707 aaKnown RBP10.5□□□□□ -0.73
CHD8-203ENST00000553283 KCNMB3Q9NPA1 279 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 AGPAT5Q9NUQ2 364 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 COL4A3BPQ9Y5P4 624 aa10.5□□□□□ -0.73
CHD8-203ENST00000553283 TBX3O15119 743 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 ASAP2O43150 1006 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 B4GALT3O60512 393 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 BRD1O95696 1058 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 ALDH2P05091 517 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 SRGAP2CP0DJJ0 459 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 GCFC2P16383 781 aaKnown RBP10.49□□□□□ -0.73
CHD8-203ENST00000553283 HOXA11P31270 313 aaPredicted RBP10.49□□□□□ -0.73
CHD8-203ENST00000553283 RFC5P40937 340 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 LAMTOR4Q0VGL1 99 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 EPHA7Q15375 998 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 PTPN14Q15678 1187 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 UBXN11Q5T124 520 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 AGMOQ6ZNB7 445 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms