RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 COMTP21964 271 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 MXRA7P84157 204 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 LNX1Q8TBB1 728 aaPredicted RBP12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 HEMGNQ9BXL5 484 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 AGAP1Q9UPQ3 857 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 USTQ9Y2C2 406 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 PDXKO00764 312 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 ZBTB5O15062 677 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 TOM1O60784 492 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 PHF2O75151 1096 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 SPAG7O75391 227 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 CFBP00751 764 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 CREB1P16220 341 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 COPS2P61201 443 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 ARHGAP4P98171 946 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 ZBTB16Q05516 673 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 GIT2Q14161 759 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 LACTB2Q53H82 288 aaPredicted RBP12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 SLC35C1Q96A29 364 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 INTS2Q9H0H0 1204 aaKnown RBP12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 LRP6O75581 1613 aa12.46□□□□□ -0.42
PPFIA2-227ENST00000552948 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 CES2O00748 559 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ASAP2O43150 1006 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 SMIM24O75264 130 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 TMEM253P0C7T8 217 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ALDH3A1P30838 453 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 GCLMP48507 274 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 PLCB3Q01970 1234 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ITIH4Q14624 930 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 QRICH1Q2TAL8 776 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 TAB3Q8N5C8 712 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RUSC1Q9BVN2 902 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 IGSF9BQ9UPX0 1349 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 WDR91A4D1P6 747 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 FOXN3O00409 490 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 CLDN3O15551 220 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 C21orf2O43822 256 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 MSH2P43246 934 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 COG2Q14746 738 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 EPHA7Q15375 998 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 SLC20A1Q8WUM9 679 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 KIAA0391O15091 583 aaKnown RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 SNX3O60493 162 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 GAS8O95995 478 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 KRT16P08779 473 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 FMO5P49326 533 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ERFP50548 548 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RAD23BP54727 409 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 SATB1Q01826 763 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 MUM1Q2TAK8 710 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 AP1ARQ63HQ0 302 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 DUPD1Q68J44 220 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 STK33Q9BYT3 514 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 DUOX1Q9NRD9 1551 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 C5orf60A6NFR6 353 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 hCG_1984214I3L0E3 225 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ATF2P15336 505 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 PALB2Q86YC2 1186 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RHOT2Q8IXI1 618 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ZNF713Q8N859 430 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 HES6Q96HZ4 224 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 SERPINB13Q9UIV8 391 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 ANAPC5Q9UJX4 755 aa12.45□□□□□ -0.42
PPFIA2-227ENST00000552948 CCND1P24385 295 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 GPC5P78333 572 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 KRT17Q04695 432 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 ZNF543Q08ER8 600 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 UBAP2Q5T6F2 1119 aaKnown RBP12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 ATG4AQ8WYN0 398 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 PGM2Q96G03 612 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 TJP1Q07157 1748 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 BCL9O00512 1426 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 RASA4BC9J798 803 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 RIPK2O43353 540 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 RASA4O43374 803 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 GSTA1P08263 222 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 MMP13P45452 471 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 CNGA2Q16280 664 aa12.44□□□□□ -0.42
PPFIA2-227ENST00000552948 ARSHQ5FYA8 562 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms