RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
LMBR1L-228ENST00000552879 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
LMBR1L-228ENST00000552879 REV3LO60673 3130 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 B4GALT5O43286 388 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 TSPAN1O60635 241 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 EDN1P05305 212 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 IGFBP4P22692 258 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 BMPR1AP36894 532 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 PHKA2P46019 1235 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 SLC12A3P55017 1021 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 LINC00301Q8NCQ3 95 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 CWH43Q9H720 699 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
LMBR1L-228ENST00000552879 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 H3BNC9 293 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 ZNF623O75123 536 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 F13A1P00488 732 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 TFDP1Q14186 410 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 SYT2Q8N9I0 419 aaPredicted RBP13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 LPPQ93052 612 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 FZD8Q9H461 694 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 PRDM6Q9NQX0 595 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
LMBR1L-228ENST00000552879 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 SLC26A4O43511 780 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 HIP1RO75146 1068 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 EOMESO95936 686 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 PLCG1P19174 1290 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 NAMPTP43490 491 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 SAMD11Q96NU1 681 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 CCSER1Q9C0I3 900 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
LMBR1L-228ENST00000552879 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.31
LMBR1L-228ENST00000552879 A0A087X0B3 334 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 GRM6O15303 877 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 OFD1O75665 1012 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 BRD1O95696 1058 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 DNAJB1P25685 340 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 CTNNB1P35222 781 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 UBA7P41226 1012 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 GPM6BQ13491 265 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 CAMK1Q14012 370 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 MCM6Q14566 821 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 PCBP1Q15365 356 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 FAM187BQ17R55 369 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 HELQQ8TDG4 1101 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
LMBR1L-228ENST00000552879 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms