RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 SLC35G2Q8TBE7 412 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 TRAPPC12Q8WVT3 735 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 UBLCP1Q8WVY7 318 aaPredicted RBP6.07□□□□□ -1.44
LIMA1-215ENST00000552823 CRYGNQ8WXF5 182 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 GLG1Q92896 1179 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 MRRFQ96E11 262 aaKnown RBP6.07□□□□□ -1.44
LIMA1-215ENST00000552823 CLMNQ96JQ2 1002 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 ADAM33Q9BZ11 813 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 AGO4Q9HCK5 861 aaKnown RBP6.07□□□□□ -1.44
LIMA1-215ENST00000552823 PRDM4Q9UKN5 801 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 TAF1LQ8IZX4 1826 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
LIMA1-215ENST00000552823 NHSQ6T4R5 1651 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 POTEB2H3BUK9 544 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 VWA5AO00534 786 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TBX3O15119 743 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 BUB1BO60566 1050 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ATP2C2O75185 946 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 GAP43P17677 238 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TCP1P17987 556 aaKnown RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 MARCKSL1P49006 195 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 POLGP54098 1239 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ADCY1Q08828 1119 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TMEM132BQ14DG7 1078 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 EDRF1Q3B7T1 1238 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ODF2Q5BJF6 829 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 MCF2L2Q86YR7 1114 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 METTL13Q8N6R0 699 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 AGBL3Q8NEM8 1001 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 PLEKHO2Q8TD55 490 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TAS1R2Q8TE23 839 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ZNF526Q8TF50 670 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 CEP89Q96ST8 783 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 MRIQ9BWK5 157 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 METTL14Q9HCE5 456 aaKnown RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 KLHL11Q9NVR0 708 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 PITPNM2Q9BZ72 1349 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 BRWD3Q6RI45 1802 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 A0A1W2PQJ5 194 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 PHF20L1A8MW92 1017 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SPOPO43791 374 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ZNF862O60290 1169 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 FECHP22830 423 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 CNGA1P29973 690 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SOX5P35711 763 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 PTGER2P43116 358 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 NPTX2P47972 431 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 NT5C2P49902 561 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SMTNP53814 917 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 BACE1P56817 501 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 GABPB1Q06547 395 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 CETN1Q12798 172 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 BFSP1Q12934 665 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 HYIQ5T013 277 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TREML2Q5T2D2 321 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SLC47A2Q86VL8 602 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 CCDC60Q8IWA6 550 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-215ENST00000552823 XXYLT1Q8NBI6 393 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 COPS5Q92905 334 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TEPSINQ96N21 525 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 ACCSQ96QU6 501 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 HEMGNQ9BXL5 484 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TRIM7Q9C029 511 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SLC38A10Q9HBR0 1119 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TUFT1Q9NNX1 390 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 TRAF3IP3Q9Y228 551 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 SBF2Q86WG5 1849 aa6.06□□□□□ -1.44
LIMA1-215ENST00000552823 MYH11P35749 1972 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 PIK3R2O00459 728 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 HGSO14964 777 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 WDR46O15213 610 aaKnown RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 DHX15O43143 795 aaKnown RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 TTI1O43156 1089 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 DAPK3O43293 454 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 PTPRAP18433 802 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 LIG4P49917 911 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 MAPK7Q13164 816 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 DMP1Q13316 513 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 DRP2Q13474 957 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 NAB2Q15742 525 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 ZBTB41Q5SVQ8 909 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 CFAP58Q5T655 872 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 ANO5Q75V66 913 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 THNSL1Q8IYQ7 743 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 CPA5Q8WXQ8 436 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 SEMA4DQ92854 862 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 ACSF2Q96CM8 615 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 MBOAT7Q96N66 472 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 FNBP1Q96RU3 617 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 PSMD1Q99460 953 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 TARS2Q9BW92 718 aaKnown RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 SIX2Q9NPC8 291 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 A1CFQ9NQ94 594 aaKnown RBP6.05□□□□□ -1.44
LIMA1-215ENST00000552823 PXMP2Q9NR77 195 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 AMFRQ9UKV5 643 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 SNX24Q9Y343 169 aa6.05□□□□□ -1.44
LIMA1-215ENST00000552823 WDR64B1ANS9 1081 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 959.3 ms