RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 LAMA3Q16787 3333 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 A0A087X0B3 334 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-234ENST00000552645 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 LRRIQ4A6NIV6 560 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 SMTNL1A8MU46 457 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 GOLGA6L6A8MZA4 724 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 SLC26A4O43511 780 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 LIG1P18858 919 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 KCNJ6P48051 423 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 CDC42EP1Q00587 391 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-234ENST00000552645 TFDP1Q14186 410 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 MXD4Q14582 209 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-234ENST00000552645 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-234ENST00000552645 CCDC183Q5T5S1 534 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 RINT1Q6NUQ1 792 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 GPBP1Q86WP2 473 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 USP38Q8NB14 1042 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 LRRC15Q8TF66 581 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 RAD54LQ92698 747 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 DHX58Q96C10 678 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 ZHX3Q9H4I2 956 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 BLOC1S4Q9NUP1 217 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 SLC4A7Q9Y6M7 1214 aa10.99□□□□□ -0.65
LETMD1-234ENST00000552645 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 GPR182O15218 404 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 ASAP2O43150 1006 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 HIP1RO75146 1068 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 ADCY5O95622 1261 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 DARSP14868 501 aaKnown RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 GLRA2P23416 452 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 EIF4BP23588 611 aaKnown RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 ARL2P36404 184 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 PHKA2P46019 1235 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 CAPSQ13938 189 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 TERF2Q15554 542 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 FAM117BQ6P1L5 589 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 ZNF410Q86VK4 478 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 FAM228AQ86W67 206 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 SYT2Q8N9I0 419 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 HERVK_113Q902F9 699 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 LARP4BQ92615 738 aaKnown RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 IFT74Q96LB3 600 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 PRO3102Q9H379 93 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 FAM53CQ9NYF3 392 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 PTPRSQ13332 1948 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 A0A1B0GVL5 298 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 CCDC169A6NNP5 214 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 SFI1A8K8P3 1242 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 POLR2DO15514 142 aaKnown RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 RESP18Q5W5W9 173 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 C1orf186Q6ZWK4 172 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 DYMQ7RTS9 669 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 CATSPER4Q7RTX7 472 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 TMCO2Q7Z6W1 182 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 MYOCDQ8IZQ8 938 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 KRT222Q8N1A0 295 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 DEPTORQ8TB45 409 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 BSNDQ8WZ55 320 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 STAMQ92783 540 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 APBB2Q92870 758 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 KIFC3Q9BVG8 833 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 INO80BQ9C086 356 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-234ENST00000552645 IFT122Q9HBG6 1241 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 STK17AQ9UEE5 414 aa10.98□□□□□ -0.65
LETMD1-234ENST00000552645 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 UPP2O95045 317 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
LETMD1-234ENST00000552645 SFPQP23246 707 aaKnown RBP eCLIP10.97□□□□□ -0.65
LETMD1-234ENST00000552645 PEX3P56589 373 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 WDR5P61964 334 aaKnown RBP10.97□□□□□ -0.65
LETMD1-234ENST00000552645 DEFB103AP81534 67 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ARSHQ5FYA8 562 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ADALQ6DHV7 355 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-234ENST00000552645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.97□□□□□ -0.655e-8■■■□□ 15.1
LETMD1-234ENST00000552645 SV2BQ7L1I2 683 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 KIFAP3Q92845 792 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 DRC1Q96MC2 740 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 MINDY3Q9H8M7 445 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 KCNH3Q9ULD8 1083 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 SQORQ9Y6N5 450 aa10.97□□□□□ -0.65
LETMD1-234ENST00000552645 EFCAB14O75071 495 aa10.96□□□□□ -0.65
LETMD1-234ENST00000552645 TBCAO75347 108 aaKnown RBP10.96□□□□□ -0.65
LETMD1-234ENST00000552645 ERLIN2O94905 339 aa10.96□□□□□ -0.65
LETMD1-234ENST00000552645 FAM13AO94988 1023 aa10.96□□□□□ -0.65
LETMD1-234ENST00000552645 AMHP03971 560 aa10.96□□□□□ -0.65
LETMD1-234ENST00000552645 PFKFB1P16118 471 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms