RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RUSC1Q9BVN2 902 aa20.45■□□□□ 0.86
PRPF40B-216ENST00000552301 TIPINQ9BVW5 301 aa20.45■□□□□ 0.86
PRPF40B-216ENST00000552301 NFKBIZQ9BYH8 718 aa20.45■□□□□ 0.86
PRPF40B-216ENST00000552301 STXBP5LQ9Y2K9 1186 aa20.45■□□□□ 0.86
PRPF40B-216ENST00000552301 COL4A6Q14031 1691 aa20.45■□□□□ 0.86
PRPF40B-216ENST00000552301 PLCG1P19174 1290 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 NAMPTP43490 491 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 MBTD1Q05BQ5 628 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 TMEM132AQ24JP5 1023 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 PAN2Q504Q3 1202 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 ATL3Q6DD88 541 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 RINT1Q6NUQ1 792 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 ECHDC2Q86YB7 292 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 ABI1Q8IZP0 508 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 SYT2Q8N9I0 419 aaPredicted RBP20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 LINC00301Q8NCQ3 95 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 SYMPKQ92797 1274 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 CLIC6Q96NY7 704 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 KCND2Q9NZV8 630 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 CFAP45Q9UL16 551 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 RWDD3Q9Y3V2 267 aa20.44■□□□□ 0.86
PRPF40B-216ENST00000552301 A0A0U1RQF3 1178 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 HIP1RO75146 1068 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 PPP6R2O75170 966 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 AXLP30530 894 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 ERVK-21P61565 698 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 FAM189BP81408 668 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 DMP1Q13316 513 aaPredicted RBP20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 NOTUMQ6P988 496 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 BSNDQ8WZ55 320 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 EPSTI1Q96J88 318 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 RC3H2Q9HBD1 1191 aaKnown RBP20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 ATP6V1DQ9Y5K8 247 aa20.43■□□□□ 0.86
PRPF40B-216ENST00000552301 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 TBKBP1A7MCY6 615 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 GTPBP6O43824 516 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 TSPAN1O60635 241 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 BRD1O95696 1058 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 KRT18P05783 430 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 IGFBP4P22692 258 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 GUCY2CP25092 1073 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 GATMP50440 423 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 DHX8Q14562 1220 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 CDCA2Q69YH5 1023 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 C1orf186Q6ZWK4 172 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 GPBP1Q86WP2 473 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 CRIPAKQ8N1N5 446 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 FBXO22Q8NEZ5 403 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 KCNG4Q8TDN1 519 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 ZNF689Q96CS4 500 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 CCDC51Q96ER9 411 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 C17orf80Q9BSJ5 609 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 POLD4Q9HCU8 107 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 FAM105AQ9NUU6 356 aa20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 PRMT7Q9NVM4 692 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-216ENST00000552301 CCDC169A6NNP5 214 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 EOMESO95936 686 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 FGFR1P11362 822 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 LIG1P18858 919 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 CTNNB1P35222 781 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 EFNA5P52803 228 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 SLC12A3P55017 1021 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 RAD51AP2Q09MP3 1159 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 MAPK6Q16659 721 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 SPOUT1Q5T280 376 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 CCDC73Q6ZRK6 1079 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 USP49Q70CQ1 688 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 LARP4BQ92615 738 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 RAD54LQ92698 747 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 TRAIPQ9BWF2 469 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 TMEM117Q9H0C3 514 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 STK17AQ9UEE5 414 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 COL6A3P12111 3177 aa20.41■□□□□ 0.86
PRPF40B-216ENST00000552301 PRKCBP05771 671 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 PEX3P56589 373 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 DNM1Q05193 864 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 TMEM192Q8IY95 271 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 PGBD4Q96DM1 585 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 CPB2Q96IY4 423 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 PRIMPOLQ96LW4 560 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 TRIM6Q9C030 488 aaPredicted RBP20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 C17orf75Q9HAS0 396 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 BLOC1S4Q9NUP1 217 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 KCNG1Q9UIX4 513 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 PCDHB2Q9Y5E7 798 aa20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 MRPL42Q9Y6G3 142 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-216ENST00000552301 NLRC5Q86WI3 1866 aa20.39■□□□□ 0.86
PRPF40B-216ENST00000552301 PHLPP2Q6ZVD8 1323 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 EPOPA6NHQ4 379 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 RFXAPO00287 272 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 CUTAO60888 179 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 STAT6P42226 847 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 ME1P48163 572 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 MCM6Q14566 821 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 EPC2Q52LR7 807 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
PRPF40B-216ENST00000552301 ZNF598Q86UK7 904 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms