RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 INPP5FQ9Y2H2 1132 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 NID2Q14112 1375 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 A0A087WZ62 844 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 GALTP07902 379 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 DRP2Q13474 957 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 KANK3Q6NY19 840 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 CATSPER4Q7RTX7 472 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 MIER3Q7Z3K6 550 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 URGCPQ8TCY9 931 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 LPPQ93052 612 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 PHKBQ93100 1093 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 PGBD4Q96DM1 585 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 FDXACB1Q9BRP7 624 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 FAM105AQ9NUU6 356 aa15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 SUCLA2Q9P2R7 463 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-210ENST00000551981 IGKV6-21A0A0C4DH24 114 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 ZNF623O75123 536 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 KLRC2P26717 231 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 TDGQ13569 410 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 PTPN14Q15678 1187 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 Q6ZUG5 572 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 FRMD5Q7Z6J6 570 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 GPR149Q86SP6 731 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 BRF1Q92994 677 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 JPH2Q9BR39 696 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 RNF26Q9BY78 433 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 GBP3Q9H0R5 595 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 GVINP1Q7Z2Y8 2422 aa15.94■□□□□ 0.14
CHMP1A-210ENST00000551981 ZNF292O60281 2723 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 OFD1O75665 1012 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 AOC1P19801 751 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 SLC11A1P49279 550 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 Q4G0T1 1027 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 ELMSAN1Q6PJG2 1045 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 BCL7CQ8WUZ0 217 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 NLRP4Q96MN2 994 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 SLC26A6Q9BXS9 759 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 VPS54Q9P1Q0 977 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 DNAJB4Q9UDY4 337 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 FBXL21Q9UKT6 434 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 C2orf16Q68DN1 1984 aa15.93■□□□□ 0.14
CHMP1A-210ENST00000551981 DDX11L8A8MPP1 907 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 MAFO75444 373 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 PSMD10O75832 226 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 CPA1P15085 419 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 CLCN4P51793 760 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 NLRP5P59047 1200 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 CWF19L1Q69YN2 538 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 C15orf39Q6ZRI6 1047 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 TBCKQ8TEA7 893 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 GJA10Q969M2 543 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 JAKMIP1Q96N16 626 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 KLHL5Q96PQ7 755 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 FAM193BQ96PV7 902 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 RTP3Q9BQQ7 232 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 SH3GLB2Q9NR46 395 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 MRPL17Q9NRX2 175 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 DPP7Q9UHL4 492 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 DUSP12Q9UNI6 340 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 PCDHB2Q9Y5E7 798 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 CNTNAP2Q9UHC6 1331 aa15.92■□□□□ 0.14
CHMP1A-210ENST00000551981 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 MEIS3P2A8K0S8 358 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 CDC45O75419 566 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 LETM2Q2VYF4 491 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 ZNF280BQ86YH2 543 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 CCDC105Q8IYK2 499 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 SH2D3AQ9BRG2 576 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 TMEM175Q9BSA9 504 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 VN1R3Q9BXE9 311 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 KCNK12Q9HB15 430 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 AGPAT5Q9NUQ2 364 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 IGSF9Q9P2J2 1179 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 SSX2IPQ9Y2D8 614 aa15.91■□□□□ 0.14
CHMP1A-210ENST00000551981 CYP3A7-CYP3A51PA0A087WV96 503 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 EDIL3O43854 480 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 STBD1O95210 358 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 ALDH2P05091 517 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 CNPP09543 421 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 IFNAR1P17181 557 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 CYP3A7P24462 503 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 PSMC5P62195 406 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 NONOQ15233 471 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 NTRK3Q16288 839 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 ERMP1Q7Z2K6 904 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 KSR1Q8IVT5 923 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 EXOC8Q8IYI6 725 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 ADSSL1Q8N142 457 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 SIX5Q8N196 739 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 FBXL16Q8N461 479 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms