RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 ZIC5Q96T25 663 aa22.7■■□□□ 1.22
NPAS3-210ENST00000551492 LRWD1Q9UFC0 647 aa22.7■■□□□ 1.22
NPAS3-210ENST00000551492 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
NPAS3-210ENST00000551492 A6NNZ2 444 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 A8MUI8 341 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 DESP17661 470 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 TUBB8Q3ZCM7 444 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 SPECC1LQ69YQ0 1117 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 NDNQ99608 321 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 NDST4Q9H3R1 872 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 TRIM10Q9UDY6 481 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 MRPL11Q9Y3B7 192 aaKnown RBP22.69■■□□□ 1.22
NPAS3-210ENST00000551492 STX17P56962 302 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 MYL5Q02045 173 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 NAALADL2Q58DX5 795 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 DYMQ7RTS9 669 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 CCDC63Q8NA47 563 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 DYDC1Q8WWB3 177 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 NAF1Q96HR8 494 aaKnown RBP22.69■■□□□ 1.22
NPAS3-210ENST00000551492 MTMR9Q96QG7 549 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 GBA2Q9HCG7 927 aaPredicted RBP22.69■■□□□ 1.22
NPAS3-210ENST00000551492 PCDHA12Q9UN75 941 aa22.69■■□□□ 1.22
NPAS3-210ENST00000551492 MSH4O15457 936 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 HUNKP57058 714 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 SYTL5Q8TDW5 730 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-210ENST00000551492 SPIRE2Q8WWL2 714 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 LENG9Q96B70 501 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 PAGE5Q96GU1 130 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.22
NPAS3-210ENST00000551492 PHIPQ8WWQ0 1821 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 EPB41P11171 864 aaKnown RBP22.68■■□□□ 1.22
NPAS3-210ENST00000551492 MKRN4PQ13434 485 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-210ENST00000551492 RNF207Q6ZRF8 634 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 CABP7Q86V35 215 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 CCT6BQ92526 530 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 FERMT2Q96AC1 680 aa22.68■■□□□ 1.22
NPAS3-210ENST00000551492 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.68■■□□□ 1.22
NPAS3-210ENST00000551492 TESPA1A2RU30 521 aaPredicted RBP22.67■■□□□ 1.22
NPAS3-210ENST00000551492 EML1O00423 815 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 ITGB5P18084 799 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 PSMC6P62333 389 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 C2orf54Q08AI8 447 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 ALS2CLQ60I27 953 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 RPS6KC1Q96S38 1066 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 RMDN3Q96TC7 470 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 NPHP3-ACAD11A0A0J9YXS1 232 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 POTEB3A0JP26 581 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 C19orf81C9J6K1 198 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 RFC5P40937 340 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 LACTB2Q53H82 288 aaPredicted RBP22.67■■□□□ 1.22
NPAS3-210ENST00000551492 POTEBQ6S5H4 581 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 NUB1Q9Y5A7 615 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 E2F6O75461 281 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 LUC7L3O95232 432 aaKnown RBP22.67■■□□□ 1.22
NPAS3-210ENST00000551492 BTG3Q14201 252 aaPredicted RBP22.67■■□□□ 1.22
NPAS3-210ENST00000551492 POSTNQ15063 836 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 MAATS1Q7Z4T9 603 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 SNX29Q8TEQ0 813 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 TUBGCP4Q9UGJ1 667 aa22.67■■□□□ 1.22
NPAS3-210ENST00000551492 TMEM150BA6NC51 233 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 TMEM221A6NGB7 291 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 E9PMD0 336 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 ZNF185O15231 689 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 HSF2BPO75031 334 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 NPTXRO95502 500 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 HTRA3P83110 453 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 NOL9Q5SY16 702 aaKnown RBP22.66■■□□□ 1.22
NPAS3-210ENST00000551492 ANKRD13CQ8N6S4 541 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 REPS2Q8NFH8 660 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 DTNBP1Q96EV8 351 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 POTEFA5A3E0 1075 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 hCG_1984214I3L0E3 225 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 ATP9AO75110 1047 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 MRPS9P82933 396 aaKnown RBP22.66■■□□□ 1.22
NPAS3-210ENST00000551492 RRAGBQ5VZM2 374 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 POTEGQ6S5H5 508 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 ZNF713Q8N859 430 aaPredicted RBP22.66■■□□□ 1.22
NPAS3-210ENST00000551492 BRD8Q9H0E9 1235 aa22.66■■□□□ 1.22
NPAS3-210ENST00000551492 DMGDHQ9UI17 866 aaKnown RBP22.66■■□□□ 1.22
NPAS3-210ENST00000551492 TARSL2A2RTX5 802 aaKnown RBP22.65■■□□□ 1.22
NPAS3-210ENST00000551492 ALOX15P16050 662 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-210ENST00000551492 MDM2Q00987 491 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-210ENST00000551492 CBX3Q13185 183 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 PABPC4Q13310 644 aaKnown RBP eCLIP22.65■■□□□ 1.22
NPAS3-210ENST00000551492 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 LONP2Q86WA8 852 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 F8VZ95 297 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 PDLIM1O00151 329 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 HERVK_113P62684 666 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 MOGSQ13724 837 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 CTTNQ14247 550 aaKnown RBP22.65■■□□□ 1.22
NPAS3-210ENST00000551492 PPP1R18Q6NYC8 613 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 ANKRD35Q8N283 1001 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 SDR16C5Q8N3Y7 309 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 PORCNQ9H237 461 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 TFR2Q9UP52 801 aa22.65■■□□□ 1.22
NPAS3-210ENST00000551492 ATP1A1P05023 1023 aaKnown RBP22.64■■□□□ 1.22
NPAS3-210ENST00000551492 FAM200BP0CF97 657 aa22.64■■□□□ 1.22
NPAS3-210ENST00000551492 PPATQ06203 517 aa22.64■■□□□ 1.22
NPAS3-210ENST00000551492 FOXB2Q5VYV0 432 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms