RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	EMILIN2	Q9BXX0	1053 aa		11.98	□□□□□ -0.49
PFKM-223	ENST00000551485	KCNK12	Q9HB15	430 aa		11.98	□□□□□ -0.49
PFKM-223	ENST00000551485	FAM105A	Q9NUU6	356 aa		11.98	□□□□□ -0.49
PFKM-223	ENST00000551485	DNAJB4	Q9UDY4	337 aa		11.98	□□□□□ -0.49
PFKM-223	ENST00000551485	PIN4	Q9Y237	131 aa	Known RBP	11.98	□□□□□ -0.49
PFKM-223	ENST00000551485	INPP5F	Q9Y2H2	1132 aa		11.98	□□□□□ -0.49
PFKM-223	ENST00000551485		A0A087WZ62	844 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	MEIS3P2	A8K0S8	358 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	MSH4	O15457	936 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	CHMP2A	O43633	222 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	B4GALT3	O60512	393 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	GAS7	O60861	476 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	OFD1	O75665	1012 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	GNA11	P29992	359 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	SFN	P31947	248 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	RAB27A	P51159	221 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	JAK3	P52333	1124 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	CDC42EP1	Q00587	391 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	C15orf39	Q6ZRI6	1047 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	KLHL5	Q96PQ7	755 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	RIT2	Q99578	217 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	GBP3	Q9H0R5	595 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	UNC45A	Q9H3U1	944 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	IGSF9	Q9P2J2	1179 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	STK39	Q9UEW8	545 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	OTOGL	Q3ZCN5	2332 aa		11.97	□□□□□ -0.49
PFKM-223	ENST00000551485	CEP250	Q9BV73	2442 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	EDIL3	O43854	480 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	ZNF623	O75123	536 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	CNP	P09543	421 aa	Known RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	KLRC2	P26717	231 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	ADD1	P35611	737 aa	Known RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	LETM2	Q2VYF4	491 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	MTERF2	Q49AM1	385 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	LRCH2	Q5VUJ6	765 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	ZNF410	Q86VK4	478 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	ZNF280B	Q86YH2	543 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	CMAS	Q8NFW8	434 aa	Predicted RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	SLC5A5	Q92911	643 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	CEP89	Q96ST8	783 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	TEKT3	Q9BXF9	490 aa		11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	NIFK	Q9BYG3	293 aa	Known RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	INO80B	Q9C086	356 aa	Predicted RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.96	□□□□□ -0.49
PFKM-223	ENST00000551485	DOCK8	Q8NF50	2099 aa		11.96	□□□□□ -0.5
PFKM-223	ENST00000551485	FRYL	O94915	3013 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	DNAH14	Q0VDD8	3507 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	IGKV6-21	A0A0C4DH24	114 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	CCDC196	A0A1B0GTZ2	297 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	TMEM150B	A6NC51	233 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	NARS	O43776	548 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	LILRB3	O75022	631 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	N4BP1	O75113	896 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	SSB	P05455	408 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	DNM2	P50570	870 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	ADCK5	Q3MIX3	580 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	TSGA10IP	Q3SY00	556 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	XKR3	Q5GH77	459 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	CATSPER4	Q7RTX7	472 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	RDM1	Q8NG50	284 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	URGCP	Q8TCY9	931 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	BICD2	Q8TD16	824 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	PGBD4	Q96DM1	585 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	CCDC136	Q96JN2	1154 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	SEMA4A	Q9H3S1	761 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	MRPL17	Q9NRX2	175 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	WNT16	Q9UBV4	365 aa		11.95	□□□□□ -0.5
PFKM-223	ENST00000551485	NID2	Q14112	1375 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	NCOR2	Q9Y618	2525 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	KRBA1	A5PL33	1030 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	STK25	O00506	426 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	PRPF3	O43395	683 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	DDHD2	O94830	711 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	STBD1	O95210	358 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	LMNA	P02545	664 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	UROD	P06132	367 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	CFH	P08603	1231 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	RFX1	P22670	979 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	AGMO	Q6ZNB7	445 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	MIER3	Q7Z3K6	550 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	RHPN2	Q8IUC4	686 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	RASEF	Q8IZ41	740 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	CCDC148	Q8NFR7	591 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	KCNG4	Q8TDN1	519 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	GJA10	Q969M2	543 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	NLRP4	Q96MN2	994 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	SH2D3A	Q9BRG2	576 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	TMEM175	Q9BSA9	504 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	HERC2P3	Q9BVR0	1158 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	RHOBTB2	Q9BYZ6	727 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	WDR6	Q9NNW5	1121 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	MAN1C1	Q9NR34	630 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	AGPAT5	Q9NUQ2	364 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	EPS15L1	Q9UBC2	864 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	PCDHB2	Q9Y5E7	798 aa		11.94	□□□□□ -0.5
PFKM-223	ENST00000551485	CLUH	O75153	1309 aa		11.93	□□□□□ -0.5
PFKM-223	ENST00000551485	CNTNAP2	Q9UHC6	1331 aa		11.93	□□□□□ -0.5

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