RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 TAS1R3Q7RTX0 852 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 LMO3Q8TAP4 145 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 PCYT2Q99447 389 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 POLR3FQ9H1D9 316 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 C17orf75Q9HAS0 396 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 HDAC6Q9UBN7 1215 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 DAAM1Q9Y4D1 1078 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 MAFBQ9Y5Q3 323 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 DENND3A2RUS2 1198 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 ENC1O14682 589 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 PNMA6AP0CW24 399 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-208ENST00000551338 FERP16591 822 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 OSBPP22059 807 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 SMTNP53814 917 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 CHMP4BP1P59074 171 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 EMC2Q15006 297 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
RAB5C-208ENST00000551338 EPC2Q52LR7 807 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
RAB5C-208ENST00000551338 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-208ENST00000551338 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 GPR88Q9GZN0 384 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 EPC1Q9H2F5 836 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 ARHGAP28Q9P2N2 729 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 DNAJC12Q9UKB3 198 aa12.54□□□□□ -0.4
RAB5C-208ENST00000551338 ZNF236Q9UL36 1845 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 GOLGA8IPA6NC78 632 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 GOLGA8JA6NMD2 632 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 F8VZ95 297 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 P4HA2O15460 535 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
RAB5C-208ENST00000551338 ARIH2O95376 493 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-208ENST00000551338 ANXA13P27216 316 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 ADSSP30520 456 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 SOX5P35711 763 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 STAT1P42224 750 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 PTK2Q05397 1052 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 ASAP3Q8TDY4 903 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 KCNN1Q92952 543 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 MMP19Q99542 508 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 PACSIN1Q9BY11 444 aa12.53□□□□□ -0.4
RAB5C-208ENST00000551338 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
RAB5C-208ENST00000551338 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
RAB5C-208ENST00000551338 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
RAB5C-208ENST00000551338 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 GFPT2O94808 682 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 GGPS1O95749 300 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 PGK2P07205 417 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 KLRC1P26715 233 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 CLCN6P51797 869 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 POLGP54098 1239 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 NEDD9Q14511 834 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 TARBP2Q15633 366 aaKnown RBP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 GPR161Q8N6U8 529 aaKnown RBP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 MORC4Q8TE76 937 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 SAAL1Q96ER3 474 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 STK33Q9BYT3 514 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 LUC7LQ9NQ29 371 aaKnown RBP12.52□□□□□ -0.41
RAB5C-208ENST00000551338 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
RAB5C-208ENST00000551338 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 H0YCG3 227 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAB5C-208ENST00000551338 PMM2O15305 246 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 BUB1O43683 1085 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 EVI5O60447 810 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 SRGAP2O75044 1071 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 LRRN2O75325 713 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 TGFB3P10600 412 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 GARTP22102 1010 aa12.51□□□□□ -0.41
RAB5C-208ENST00000551338 RFX1P22670 979 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms