RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 AMHR2Q16671 573 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 LONRF3Q496Y0 759 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 TTC38Q5R3I4 469 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 OTUD6AQ7L8S5 288 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 TMEM173Q86WV6 379 aaPredicted RBP14.53□□□□□ -0.08
NPAS3-209ENST00000551008 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
NPAS3-209ENST00000551008 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 VN1R2Q8NFZ6 395 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 MTRQ99707 1265 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 FAM105AQ9NUU6 356 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 CLDND1Q9NY35 253 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 TRIP11Q15643 1979 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 GAS2O43903 313 aaKnown RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 ZNF623O75123 536 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 LAG3P18627 525 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 GLRA2P23416 452 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 TECP42680 631 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 PTENP60484 403 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 ORC2Q13416 577 aaPredicted RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 ADAM15Q13444 863 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 IL17AQ16552 155 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 TWF2Q6IBS0 349 aaKnown RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 PTCRAQ6ISU1 281 aaPredicted RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 KCNT2Q6UVM3 1135 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 AGMOQ6ZNB7 445 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 SRGAP1Q7Z6B7 1085 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 FAM178BQ8IXR5 827 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 BCL7CQ8WUZ0 217 aaPredicted RBP14.52□□□□□ -0.09
NPAS3-209ENST00000551008 MSLNLQ96KJ4 702 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 TUFT1Q9NNX1 390 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 GPRC5CQ9NQ84 441 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 DACT1Q9NYF0 836 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 CLEC1BQ9P126 229 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
NPAS3-209ENST00000551008 HOXA2O43364 376 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 TSPAN1O60635 241 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 TRAPPC10P48553 1259 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 PLCB3Q01970 1234 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 UBE3AQ05086 875 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 MBTD1Q05BQ5 628 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 SPOUT1Q5T280 376 aaKnown RBP14.51□□□□□ -0.09
NPAS3-209ENST00000551008 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
NPAS3-209ENST00000551008 SLC39A11Q8N1S5 342 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 FAM184AQ8NB25 1140 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 IL27Q8NEV9 243 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 BSNDQ8WZ55 320 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 POLR3CQ9BUI4 534 aaPredicted RBP14.51□□□□□ -0.09
NPAS3-209ENST00000551008 INO80BQ9C086 356 aaPredicted RBP14.51□□□□□ -0.09
NPAS3-209ENST00000551008 PCDHB12Q9Y5F1 795 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 MYH11P35749 1972 aa14.51□□□□□ -0.09
NPAS3-209ENST00000551008 USO1O60763 962 aaKnown RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 OFD1O75665 1012 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 DGAT1O75907 488 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 XRCC6P12956 609 aaKnown RBP eCLIP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 RPA1P27694 616 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 NRIP1P48552 1158 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 KCNC3Q14003 757 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 CLUL1Q15846 466 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 EXOC8Q8IYI6 725 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 THNSL1Q8IYQ7 743 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 EFHBQ8N7U6 833 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 SMG8Q8ND04 991 aaKnown RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 MRPS27Q92552 414 aaKnown RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 ZNF558Q96NG5 402 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 EIF2AQ9BY44 585 aaKnown RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 POLR3FQ9H1D9 316 aaPredicted RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 IGFLR1Q9H665 355 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 NRDE2Q9H7Z3 1164 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 TLR9Q9NR96 1032 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 AAASQ9NRG9 546 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 TBC1D13Q9NVG8 400 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
NPAS3-209ENST00000551008 LZTS1Q9Y250 596 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 PCDHB2Q9Y5E7 798 aa14.5□□□□□ -0.09
NPAS3-209ENST00000551008 TRIOO75962 3097 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 TTLL13PA6NNM8 815 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 HIDE1A8MVS5 230 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 NT5C1B-RDH14C9J2C7 533 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 PER2O15055 1255 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 ASAP2O43150 1006 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 B4GALT5O43286 388 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 MBTPS2O43462 519 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 EDN1P05305 212 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 BCAR1P56945 870 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 POU5F1BQ06416 359 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 MXD4Q14582 209 aaPredicted RBP14.49□□□□□ -0.09
NPAS3-209ENST00000551008 DUSP6Q16828 381 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 RBM23Q86U06 439 aaKnown RBP14.49□□□□□ -0.09
NPAS3-209ENST00000551008 ABI1Q8IZP0 508 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 IGSF22Q8N9C0 903 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 CPB2Q96IY4 423 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 VN1R3Q9BXE9 311 aa14.49□□□□□ -0.09
NPAS3-209ENST00000551008 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms